Gene Jann_4181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4181 
Symbol 
ID3936670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4290679 
End bp4291185 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content58% 
IMG OID637906567 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_512123 
Protein GI89056672 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG ACGCAAACAT CGAAGAACCT AAGAAGAAGA AGGGCTTACT CGTGCCACTT 
CTCCTGGGTG TGATTCTTGC CGCTGCCGGC GGCGGTGGTG GCTTCTGGGC CGTGACACAG
GGCCCCCTTG CGCCCGAAAG CACGATGGAG ACGCCCGTAG AAACCGCGGC AGAGCACGAT
GACGATGCCA CCCACATGGA TGCGGTCGAC GTCGCCTTCC TAGAGCTGGA AACGCTGGTG
ATCACATTGG GCGCCGAAGA ATCGAATCGG AACCTGATCT TCTCCGCATC TCTGGAGATC
GCCCCGCAAT ATCTGGATGA AGTGACTCAG CTCTCGCCAA GGGTTCTCGA CGTCCTCAAC
TCCTATTTGC GCGTGATCGC CATCTCCGAG CTGAGCGAAC CGACAAGCCT CGCACGTCTT
CGGTCCCAAA TGCTGCGCCG CATCCAGGTG GTGACCGGCA CTGGCCGAGT TCAAAACCTC
CTCGTCACAC AATTTCTGGT GAACTGA
 
Protein sequence
MSEDANIEEP KKKKGLLVPL LLGVILAAAG GGGGFWAVTQ GPLAPESTME TPVETAAEHD 
DDATHMDAVD VAFLELETLV ITLGAEESNR NLIFSASLEI APQYLDEVTQ LSPRVLDVLN
SYLRVIAISE LSEPTSLARL RSQMLRRIQV VTGTGRVQNL LVTQFLVN