| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4175 |
|---|
| Symbol | |
|---|
| ID | 3936664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 4284396 |
|---|
| End bp | 4285406 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637906561 |
|---|
| Product | flagellar hook-associated protein FlgL family protein |
|---|
| Protein accession | YP_512117 |
|---|
| Protein GI | 89056666 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTG CCACCTATTC CGACGCAGCG CAGTTCCAAC TCCTTCGGCG CGACGCCACG
CAGCATCGTG CCGATCTCGC GCGTCTAACA TCGGAGCTAT CGTCGGGCCG GGTCGCGGAC
CTTGGACAGG CTCTCCAGGG GGACTACTCC ACCCTCTCGG ACATAACGCG CAGCTTGCGC
CTGAATACGA CTTTCATCAC GTCCGTGTCC GAGGCTGCAA TTGCTGTCGG CGTCCGTCAA
AGTGCCCTCG AAAGAGTAGC GTCCGAGCTG GAAGGTTACG GATCCTCTCT TCTGGCTGTG
ACGGGTGCAG GTAGTTTGTC GGATATTCAA CTCAAATTGG CAGATGCCCC AGCGCGTTTC
GACCAAGCCG TGGATAGCCT AAACACACGC CTCGCCGGTC GCAGCCTCTT TTCCGCCGAC
GATCCGAATG CAACACCACT TATCAGCTCA GAAGATATGT TGGCTGAACT CAGAACGGTT
GCCGCCGGTG CGCTCGACGC CGCCACTGCG GTGGCCGACG TCACAGCTTG GTTCATGGAT
ACTGGCGGAG GGTATGAGAC ACTGGCCTGG CAAGGCGGTA CGGGCGATCC GCCTCCTGTC
CTGATAGGCG AGGGTCAATC AGCTGAAACC GGTGTCACGG CTTTGAACCC CGCCATCCGC
GAAACTTTGG CCAGCCTTGC ACTGGCAGTT CTCGCGTCAG AAGAGGTACC AGCCTCTGCG
GAGCAAGAGA AACGCGCATT CGTCGCGTCC GCCGCCGAAC AAGTGCTGCG TGCCGAGAGC
AATTTGATTG GCCTCCGCGC GCGTCTCGGC ACTGAAGAAG CACGCGTTGA AGACGCAAGG
GTCACCGCCG AAGCGACCCG TGCCAGCTTG CAAATCGAGT ACGGACGGTT GGTTGAAGCT
GATCCCTACG ACACGGCAAC GGAATTGGAG GCTATCTCTC TCCGTCTCGA AAGCCTGTAT
ATTGTGACCG CGCGCGTCTC GCGCTTGAGC TTGACGGAGT ACCTCAGGTG A
|
|---|
| Protein sequence | MSIATYSDAA QFQLLRRDAT QHRADLARLT SELSSGRVAD LGQALQGDYS TLSDITRSLR
LNTTFITSVS EAAIAVGVRQ SALERVASEL EGYGSSLLAV TGAGSLSDIQ LKLADAPARF
DQAVDSLNTR LAGRSLFSAD DPNATPLISS EDMLAELRTV AAGALDAATA VADVTAWFMD
TGGGYETLAW QGGTGDPPPV LIGEGQSAET GVTALNPAIR ETLASLALAV LASEEVPASA
EQEKRAFVAS AAEQVLRAES NLIGLRARLG TEEARVEDAR VTAEATRASL QIEYGRLVEA
DPYDTATELE AISLRLESLY IVTARVSRLS LTEYLR
|
|---|
| |