Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4165 |
Symbol | |
ID | 3936654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 4274409 |
End bp | 4275260 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637906551 |
Product | hypothetical protein |
Protein accession | YP_512107 |
Protein GI | 89056656 |
COG category | [S] Function unknown |
COG ID | [COG3246] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGT GTTCTTCGAT GTCTGACCCC AAACCCTGCA TCATCTGTGT GGCCATCACC GGCTCTGTGC CCACAAAGGC CGCAAACCCT GCCGTTCCGA TCACGGTAGC CGAACAGATC GAGTCCACCC ATGCCGCGTT TGAGGCGGGC GCGGCCATCT GCCATGCCCA TGTCCGCAAC GATGATGAAA CACCCTCCTC GGACCCCGAA AAGTTCGCCC GCCTGAAAGA GGGCGTTGAG GGGCATTGTC CCGGTATGAT TGTCCAACTT TCCACTGGCG GGAGGTCGGG CGCGAGCAAG GAACGGGGTG GGATGCTCCC CTTGCGGCCC GATATGGCGT CGCTGTCTGT GGGCTCAAAC AACTTCCCCA CCCGCGTCTA TGAGAACCCG CCCGACCTGG TCGATTGGCT GGCCGCCGAG ATGCGCACGT ATGACATAAA GCCCGAGATT GAGGCCTTTG ACCTCAGCCA TATTCACCAT GCCGCCCTGA TGCATCAACG GGGGCAGTTG GCCGGCCACC CCTATGTGCA ATTCGTCATG GGCGTCAAAA ATGCCATGCC CGCCGACCGG GAGACATTTG ATTTCTATGT CGCGACCATG ACGCGGTTGT TGCCTGAGTC CGAGTGGTGT GCGGCAGGCA TTGGGCCCAA CCAGATCGTC CTGAACGAAT GGGCCATTGC AGCGGGTGGC CATGCGCGGA CTGGATTGGA AGATAACGTG CGCTGGGACA AACAGACCCT CGCGCCGTCC AATGCTGCGT TGGTCGAGCG CACGGCTGAG ATCTGCGAAA AGAACGGGCG ACCGGTGGCC ACGACGGCAC AGGCGCGAGA GATATTGGGC CTGCGTACCT AG
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Protein sequence | MKWCSSMSDP KPCIICVAIT GSVPTKAANP AVPITVAEQI ESTHAAFEAG AAICHAHVRN DDETPSSDPE KFARLKEGVE GHCPGMIVQL STGGRSGASK ERGGMLPLRP DMASLSVGSN NFPTRVYENP PDLVDWLAAE MRTYDIKPEI EAFDLSHIHH AALMHQRGQL AGHPYVQFVM GVKNAMPADR ETFDFYVATM TRLLPESEWC AAGIGPNQIV LNEWAIAAGG HARTGLEDNV RWDKQTLAPS NAALVERTAE ICEKNGRPVA TTAQAREILG LRT
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