Gene Jann_4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4165 
Symbol 
ID3936654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4274409 
End bp4275260 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content61% 
IMG OID637906551 
Producthypothetical protein 
Protein accessionYP_512107 
Protein GI89056656 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGT GTTCTTCGAT GTCTGACCCC AAACCCTGCA TCATCTGTGT GGCCATCACC 
GGCTCTGTGC CCACAAAGGC CGCAAACCCT GCCGTTCCGA TCACGGTAGC CGAACAGATC
GAGTCCACCC ATGCCGCGTT TGAGGCGGGC GCGGCCATCT GCCATGCCCA TGTCCGCAAC
GATGATGAAA CACCCTCCTC GGACCCCGAA AAGTTCGCCC GCCTGAAAGA GGGCGTTGAG
GGGCATTGTC CCGGTATGAT TGTCCAACTT TCCACTGGCG GGAGGTCGGG CGCGAGCAAG
GAACGGGGTG GGATGCTCCC CTTGCGGCCC GATATGGCGT CGCTGTCTGT GGGCTCAAAC
AACTTCCCCA CCCGCGTCTA TGAGAACCCG CCCGACCTGG TCGATTGGCT GGCCGCCGAG
ATGCGCACGT ATGACATAAA GCCCGAGATT GAGGCCTTTG ACCTCAGCCA TATTCACCAT
GCCGCCCTGA TGCATCAACG GGGGCAGTTG GCCGGCCACC CCTATGTGCA ATTCGTCATG
GGCGTCAAAA ATGCCATGCC CGCCGACCGG GAGACATTTG ATTTCTATGT CGCGACCATG
ACGCGGTTGT TGCCTGAGTC CGAGTGGTGT GCGGCAGGCA TTGGGCCCAA CCAGATCGTC
CTGAACGAAT GGGCCATTGC AGCGGGTGGC CATGCGCGGA CTGGATTGGA AGATAACGTG
CGCTGGGACA AACAGACCCT CGCGCCGTCC AATGCTGCGT TGGTCGAGCG CACGGCTGAG
ATCTGCGAAA AGAACGGGCG ACCGGTGGCC ACGACGGCAC AGGCGCGAGA GATATTGGGC
CTGCGTACCT AG
 
Protein sequence
MKWCSSMSDP KPCIICVAIT GSVPTKAANP AVPITVAEQI ESTHAAFEAG AAICHAHVRN 
DDETPSSDPE KFARLKEGVE GHCPGMIVQL STGGRSGASK ERGGMLPLRP DMASLSVGSN
NFPTRVYENP PDLVDWLAAE MRTYDIKPEI EAFDLSHIHH AALMHQRGQL AGHPYVQFVM
GVKNAMPADR ETFDFYVATM TRLLPESEWC AAGIGPNQIV LNEWAIAAGG HARTGLEDNV
RWDKQTLAPS NAALVERTAE ICEKNGRPVA TTAQAREILG LRT