| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4157 |
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| Symbol | |
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| ID | 3936646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4269102 |
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| End bp | 4269761 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906543 |
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| Product | anti-sigm factor, ChrR |
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| Protein accession | YP_512099 |
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| Protein GI | 89056648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.424525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA ATGCGGATTT CTCGGAAAGA GTGATGGTGC AGTCGGCCGA TCTGGACTGG
GTCGCCTCGC CCATGCCTGG CGTTGACCGC CGGATGCTTG ACCGCATCGG CGGGGAGGTC
GCGCGGGCGA CGTCCATCGT GAGGTATGCG CCGGGCTCAA ACTTCTCGGC CCATACCCAT
ACCGGCGGGG AGGAGTTCGT CGTCCTCGAT GGCGTGTTTC AGGATGAGCA CGGGGATTAC
CCGGCGGGTA CCTATGTGCG CAATCCGCCA ACGACATCCC ATACCCCGGG CTCGGACGAG
GGATGCACGA TCTTTGTGAA ACTGTGGCAG TTCGACATGG ACGACCGGAC GCAGTTTCGC
CGCGACATGG CGGCTGGAGG CGACCGATCT GTCCTTCACG AAGATGCGTT TGAGATCGTG
ACCTACCACC GACTTGCCCC CGGCGCGGCG CTTGAGGACC CGGCCGATGG CGGGGCTGAG
TTGTTGGTGC TGGCAGGCAG CCTGACGGAA GGTGGAGACA CGCTGATCAC AGGGGGCTGG
CTTCGCTTGC CGGAAAGCTC CACGATGCAT GCCGTCGCCG GGTCCGAGGG CGCGACGGTC
TGGATGAAGA CCGGGCACCT GCCCCACGCC AAACCACCAG CGGTAGGGCG GACCCGCTGA
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| Protein sequence | MDINADFSER VMVQSADLDW VASPMPGVDR RMLDRIGGEV ARATSIVRYA PGSNFSAHTH
TGGEEFVVLD GVFQDEHGDY PAGTYVRNPP TTSHTPGSDE GCTIFVKLWQ FDMDDRTQFR
RDMAAGGDRS VLHEDAFEIV TYHRLAPGAA LEDPADGGAE LLVLAGSLTE GGDTLITGGW
LRLPESSTMH AVAGSEGATV WMKTGHLPHA KPPAVGRTR
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