| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4149 |
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| Symbol | |
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| ID | 3936638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4259639 |
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| End bp | 4261681 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637906535 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_512091 |
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| Protein GI | 89056640 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.498458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGA TCGTCGACTG CATTACACAG GCCCATGACG TCGGGCTATT GTTGGTGGCC
ATTTTGGTTT GTGTAACCGG ATGCTGCCTG TCTGTCCTGG CGTCTCGCCG GTTGCGCAAT
GCGTCCCTTC AACGCCGCCG CGCTCAATTG TTCCTTGCGG CTTTGCTGAC CGGATCCACC
ATCTGGTCCA CGCATTTCAT AGCTATGCTC GCCTTTGAGC CGGGCGTGGA TCATGGCTAT
GGCCCTGTAT TAACTGGCCT TTCCTTTCTT GCCGCTATCT TCGGAACGCT GATTGCGGGT
CTTGTGTTTG CGACGCGCAA AAGCCTGGGT TGGACGCTTA TGGCTGGCGC GGCATTCGGT
GCGACGGTGG CCGTCATGCA CTATATCGGA ATGCAAGCGT ATCTGCTTCC GGGCCGTATC
CTTTGGAATG TTGAGCTGAA ACTCGCATCG GTTGTCATTG GCGTTGCGCT GGGGGCTGTA
GCCTACCACC GCATTGCATA CCCGGTTACG CGCTATTGCT GGCTGGGCGG TGCGACGCTC
ATGGCGTTGA GCATCTGCTC CCTCCACCTG ATCGGTATGG CGTCGATTTC TATCGAACTG
AGTCCGCTAG CGGTTGTTCC ACCTCAGGTC ATTTCTGATC ACGTGCTGGG GCATCTGGTA
TTTGGCGTCA CTGCGATCAT TCTGGCTGTT GGCTTTGCAG CGTTGAGTAT TGAGAGCAAA
CTTGAAGATG AAGCGATGCT GAAGCTGGCC CATGCAGCAT CCCATGACCA CCTGACCGGC
ATTCCCAACC GATTATGGTT GTCGGAATGG CTTGAGAAGT TCGGCCGAGA CAAGATCGCC
GGGCGTCGTC ACACGATAGC AATCATCGCT ATCGATTTGG ACAACTTTAA GGAAATCAAC
GATTTGCGCG GACATGCGGC TGGGGATCTT GTCCTGCGGA CCGTGGCCTC ACGCCTTGTC
GCCGTGTGCA AGGACGACGA AGATGTCGCG CGCAGTGGCG GGGATGAATT CACGGCGATC
AAGACCGGGT TCTCACGATT GGACGAGGTG ATCGATTTTG CGAACCGGTT GCGCGGTGTT
CTTGAGGCGC CCGTCGAAGC AGCCGCATAC CTCGCCCAAC TGGATGGCTC TCTGGGCATC
GCCACAAGCC TCAAGGATGG CGAAAACACC GATGATCTGA TCCAAAAGGC AGATTTTGCC
ATGTATCGCG CCAAGGCTTC GACCGATACG AACATCTGCG TCTACGATGC TGAAATGGAT
GAGCAAAACC GCGAAAGGAT CATGCTTGTC TACGACTTAC GAAGCGCAAT TTGCAATGAA
GAGTTCGAAC TCGTCTATCA GCTCCAGCAC GATCTGAGCA ATCTTGAACC GATTGGCTGT
GAGGCCCTGT TGCGGTGGCG ACATCCCAAG CGTGGATTGG TGCCGCCTGA CAGATTTATC
CCAATCGCCG AAGAGACGGG GATTATCCAG GATATCGGCT TCTGGGTTCT GCGCACCACA
TGCATTGAAG CCGCCAGTTG GACGCAACCC CTGAGCCTTG CGGTCAATGT CGCGCCGCAG
CAACTGACCC AACCGACATT TCTAGAAAAC CTGGCGGACG TTTTAGCGGA AAGCGGCTTG
GAGCCGCGCC GGCTGGAGTT GGAGGTCACC GAAGCCAGCG TGATCTCTGA CCAGGCATTT
ACACTGGAGA TTATTAAGAA AATCAAAGCG ATGGGTGTTC GCATCGCCAT GGATGACTTC
GGAACCGGAT ATTCTTCTTT GGCCACGTTA CAGATGTTCC CGTTTGACAA AATCAAGATC
GACAGAAGTT TCATAACCGA TGTCCATGAC GACCCTCAGC GCGCAGCCAT TGTCCGGGCA
ACCTTGTTGC TTGGCTCATC CCTCGGCATT CCGGTCTTGG CCGAAGGAGT CGAGCAGGAA
AAGGAACTCC ACTTCCTGCA AAGTGAAGGC TGTTCCTTTG TCCAAGGCTA CTACTTTGGT
CGGCCTCTGT CGCTCGAGGA TTTGCGCGCC GTCGTCAGTG GCGCACATCG CGCGGTCGCA
TAG
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| Protein sequence | MNRIVDCITQ AHDVGLLLVA ILVCVTGCCL SVLASRRLRN ASLQRRRAQL FLAALLTGST
IWSTHFIAML AFEPGVDHGY GPVLTGLSFL AAIFGTLIAG LVFATRKSLG WTLMAGAAFG
ATVAVMHYIG MQAYLLPGRI LWNVELKLAS VVIGVALGAV AYHRIAYPVT RYCWLGGATL
MALSICSLHL IGMASISIEL SPLAVVPPQV ISDHVLGHLV FGVTAIILAV GFAALSIESK
LEDEAMLKLA HAASHDHLTG IPNRLWLSEW LEKFGRDKIA GRRHTIAIIA IDLDNFKEIN
DLRGHAAGDL VLRTVASRLV AVCKDDEDVA RSGGDEFTAI KTGFSRLDEV IDFANRLRGV
LEAPVEAAAY LAQLDGSLGI ATSLKDGENT DDLIQKADFA MYRAKASTDT NICVYDAEMD
EQNRERIMLV YDLRSAICNE EFELVYQLQH DLSNLEPIGC EALLRWRHPK RGLVPPDRFI
PIAEETGIIQ DIGFWVLRTT CIEAASWTQP LSLAVNVAPQ QLTQPTFLEN LADVLAESGL
EPRRLELEVT EASVISDQAF TLEIIKKIKA MGVRIAMDDF GTGYSSLATL QMFPFDKIKI
DRSFITDVHD DPQRAAIVRA TLLLGSSLGI PVLAEGVEQE KELHFLQSEG CSFVQGYYFG
RPLSLEDLRA VVSGAHRAVA
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