| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4138 |
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| Symbol | |
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| ID | 3936627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4248008 |
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| End bp | 4249033 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906524 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_512080 |
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| Protein GI | 89056629 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000148072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGGAC CCAATATGAT CACGAATTTC ACCCGCCGTA TGGCGCTTTC AACCGCTGCC
GCCATTGGCA TCATCGCCAG CACGACCGGC GCCTTTGCCG ATGGTCACGC GATCCAGTTG
CGTCTGTCCA TGGCAGGCTC CGAGACGGAC CAGCGCTCGG TTGCAATGGC CGAGGTGTTC
GGCCCCGCGG TCTCCGACTT CGCCAGCTAC GAGCCCGCCT ATAACGCGAC GCTGTTCGCG
CAAGGTACGG AGCTTGAGGC GATCAGCCGT GGCAACCTTG AGATGGCGAT TTCCTCGGCG
CAGGAGATGG CGCAGTTCTT CCCCGAATTC TCCATCTTCA CCGCCGGTTA TGTCCATCAG
GACGCCGCCC ATCAGGTGGC TGTGTTCAAC GATCCGCTGA TGGACCCTTT CAAGCAGATC
GCGATTGATG AGCTTGGCGT GCGCCTTCTG TCGGTCATGT ATCTGGGTCG CCGTCACGTG
AACCTGCGCC AGTGCCCCGA TGAACTGACT GTAACGACGC CCGCCGATCT GGATGGTGTG
AACCTGCGGA TGCCGGGAAC GGACGCGTGG CAATTCCTTG GGTCTGCCCT CGGTGCTTCG
CCCACGCCGA TGTCCTTTGG CGAGGTCTAT ACCGCGCTGT CCACCGGCGC CGTGGACGGG
CAGGACAACC CGCTACCAAC CGTTGTGGAC GCCCGCTTTT ATGAGGTGAC GTGCCAGATC
GCGCTGACGT CGCATCTGGT GGACCTGAAC TACATCACGA TTTCGGAAGA GGTCTGGCAA
TCCATGACGC CAGAGCAGCA GGAGACCGTC CAGCAGGCCG CCGATGACGC CGCCGCATTG
GGCCGCGAGC GTCAGCTGCA GTTGGAAGCA GACCTTGGTG CGCGTCTGGA GGAAGAGGGG
CTGACCTTGT ACGAGCCTGA CCTCGCCGCT TTCCGCGACG CCGTGCAATC GGCCTATCTT
GGTAGCGAGT TTGCCGAAAC CTGGCCCGAC GGCGTGCTGG AGCAGATCAA CGCGCTCGGC
AACTAA
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| Protein sequence | MGGPNMITNF TRRMALSTAA AIGIIASTTG AFADGHAIQL RLSMAGSETD QRSVAMAEVF
GPAVSDFASY EPAYNATLFA QGTELEAISR GNLEMAISSA QEMAQFFPEF SIFTAGYVHQ
DAAHQVAVFN DPLMDPFKQI AIDELGVRLL SVMYLGRRHV NLRQCPDELT VTTPADLDGV
NLRMPGTDAW QFLGSALGAS PTPMSFGEVY TALSTGAVDG QDNPLPTVVD ARFYEVTCQI
ALTSHLVDLN YITISEEVWQ SMTPEQQETV QQAADDAAAL GRERQLQLEA DLGARLEEEG
LTLYEPDLAA FRDAVQSAYL GSEFAETWPD GVLEQINALG N
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