| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4137 |
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| Symbol | |
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| ID | 3936626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4247393 |
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| End bp | 4247986 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906523 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_512079 |
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| Protein GI | 89056628 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000154832 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCACA AGCTGAAGGC GGGCGTCTCC ACCCTCACAA ATTCCATCGC CGCGGCCCTG
CTTGCGGCGA TGTTTTTCAC GTTCCTCCTT CAGGTCGGGT CCCGCTACAC GCCGCAGATC
GTGGACAATT TCGGGCTGAG CGGACGTTAC GCATGGCTCG ACAGCATCGA ACCCCTCGGC
TGGACGCTGG AATTGTGCCT GATCCTATGG GTCTGGATCG TGTTCTTCGG CTGCGCCTTC
AATGTGCGCG AGAAGGATCA TGTGACGTTC GACATCTTCT ACCTCGCCGC GCCACCCGGA
CCCCGCCGGA TCATGGCGCT GATCGCGTCC GGTGCCATTG TCGTCGGGAT GGCAATCTCG
TTCTGGCCGA CATGGGACTA CGTGGATTTC ATGCGGATGC GTCGGACGTC GACCGTTGAA
AACCCGTTCA CCGGCGACCG CATTCGCCTG AAATGGATCT TCATCATCTA CATGGTGTTC
CTCGGCGCGC TGGTCGCGCG CTACGGCTGG CGGTTCATCT CTACGCTCCG AAATGGCCCG
CCCGACGATC ATCACCTGAT TGACGACGCC GCAGCCCACG AGCGCGCGCC ATGA
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| Protein sequence | MLHKLKAGVS TLTNSIAAAL LAAMFFTFLL QVGSRYTPQI VDNFGLSGRY AWLDSIEPLG
WTLELCLILW VWIVFFGCAF NVREKDHVTF DIFYLAAPPG PRRIMALIAS GAIVVGMAIS
FWPTWDYVDF MRMRRTSTVE NPFTGDRIRL KWIFIIYMVF LGALVARYGW RFISTLRNGP
PDDHHLIDDA AAHERAP
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