| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4136 |
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| Symbol | |
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| ID | 3936625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4246101 |
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| End bp | 4247396 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906522 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_512078 |
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| Protein GI | 89056627 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0269529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.625753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTG AGGTTCTGGC CTGCATCGCC ACGCTGTTTT TCCTCGCGGG CATCGGCACA
CCCATAGGCT ATTCGATCAT CCTCGCCTCG CTGGTCTACC TGGGCCTCGG CGGCATGGAC
CTGGCGCTGG CCGGTGAAAA GATTATCCAG GGCCTCTACC GCAGTTTCGT GCTGCTGGCC
GTGCCGCTGT TCATCGTCGC CGCCAACATC ATGAACGCGG GCACGATTTC CGACCGGTTG
CTGAATTTCT GCGTCGCCGC CGTGGGGCGC TTTCGGGGCG GGTTGGGCCA TGTGAATGTT
GTGGCCTCGC TGATCTTTTC GGGCATGTCC GGGTCTGCCG TGGCGGATGC GGCGGGCATC
GGCAAGATCA TCATCCAGAT GATGACCAGG GATGGCCGCT ACGGGCGTGG ATACGCCGCC
GCGATCACAG CTGCATCTGC TACGATCGGG CCGATCATCC CGCCCTCGAT CCCCATGGTG
CTTTACGCGC TCGTGTCCCA ATCCTCCATC GGGGCATTGT TTTTGGCGGG GATCATTCCT
GGGCTGATCA TGGGTATCGT GCTGATGGCG ATGAACAGTG TCATCGCCCA CAAACGTGGC
TTTGCGCTGG AAGAGCCGGT GCCGCTGCGC GATCTGCCAA AGAAAACCGC AAACGCCTTT
CCCGCACTTC TGATGCCGGT GATCCTGCTC TACGGCATCT ACGGTGGCGT CACGACACCG
ACGGAGGCCG CTGCCGTCGC CGCGCTCTAT GCGCTTCTGC TGGCCGGGCT GTTCTACCGC
GCGCTCAGCC TCCGGGGCCT CTACGACATC TTCGTGGACA GCGCGCGCGC CTCCGCGTCT
GTCGGCGTTG TCATCGGCGG TGCGCTGATC CTGAATTTTA TCGTCGCGTC TGAAAATATC
CCCGGCATGG TTGCTGATGC GCTTGTGGGG ATCGAGATGA GCCCGACGTT CTTCCTGCTG
CTGGTGATGC TGCTTGTCCT GCTCCTCGGC TGCGTTCTGG ATGCCACGAC CATCATCCTC
GTGATCGTGC CCCTTTTCAT TCCCGCCTGC CGAGAGCTTG GAATCGACCT TGTCCATTTC
GGCGTGCTGG TCGTCGTCAA TTCCATGATT GGCCTGATCA CGCCGCCCTA CGGCATCCTG
CTGTTCGTCA TCAACGCCGT CACCGGCATT CCGCTGCGAG AGATCATATC CGAGATCTGG
CCGTTCCTGG CCGTCCTGAT CCTTGCACTC TTGCTCCTCG TCTTTATGCC GGGCCTTGTT
CTATGGTTGC CGGGCCAGTT CGGCTACGGC GGCTGA
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| Protein sequence | MSFEVLACIA TLFFLAGIGT PIGYSIILAS LVYLGLGGMD LALAGEKIIQ GLYRSFVLLA
VPLFIVAANI MNAGTISDRL LNFCVAAVGR FRGGLGHVNV VASLIFSGMS GSAVADAAGI
GKIIIQMMTR DGRYGRGYAA AITAASATIG PIIPPSIPMV LYALVSQSSI GALFLAGIIP
GLIMGIVLMA MNSVIAHKRG FALEEPVPLR DLPKKTANAF PALLMPVILL YGIYGGVTTP
TEAAAVAALY ALLLAGLFYR ALSLRGLYDI FVDSARASAS VGVVIGGALI LNFIVASENI
PGMVADALVG IEMSPTFFLL LVMLLVLLLG CVLDATTIIL VIVPLFIPAC RELGIDLVHF
GVLVVVNSMI GLITPPYGIL LFVINAVTGI PLREIISEIW PFLAVLILAL LLLVFMPGLV
LWLPGQFGYG G
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