| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4121 |
|---|
| Symbol | |
|---|
| ID | 3936610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 4229069 |
|---|
| End bp | 4229932 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637906507 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_512063 |
|---|
| Protein GI | 89056612 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGTC TAAAGACGAA TGAAGATGCC CTGGTCGAGA TGGCCGTGTC AGGCGTGATC
ACCACGCCTG CCGTGCGCCC CGGACAATAT ATTCCCTACC CCGATGGCAC CGCGACGGTC
CTGCCGGGCA TGTATGGGAT CACCTACAAT GTGCGTTGCG GCGACCGGGC GTTCGGGTGG
GCGGGCGACC ATGTGGAGCC TGGCGTGTCC ATTGACGATG ACGCGGATGC AGGCCGCCAT
CACGCGCTGC ATTACCTCAA TTGCATCGGG AATGAGGCGT TGGTGACGTC GGGCATGGCC
GCGGGCGCGC GCGGCATCGT GGTGGGCGAA CACGCGCGCA TTCTGGTGCA GTTTGACGCC
GATGCCCATG ACGTGATGGC CCCGGGAGAC CGCATTCAGG TAATGACGAA AGGCCAGGGT
CTGACCCTGA CGGATTATCC TGGCGTGGCC CTCAAAAAGA TGAGCCCACG TCTGTTCCAT
GCGCTTGGCA TCACGGAAAG CGATGGGCGA TTGCATGTGA GCGTCGCGAT GGAGCTGCCC
ATCCGCATCA TGGGCTCGGG CGCAGAGCTG AATTCCGAAT ATGTCGATCA GGACCTGATG
TCCGGCGACC GGGCGTTGAT GGCGGAGTTG GGCATCGACC AGATGCGCCT TGGTGACGTG
ATCGCCATCC GCCATGCGGA CCACCATTGG GGCCGGTCCT ACCGCGAGGG GGCCGTGTCG
ATCTGTCTGT GCATCCATGG CGACAGCGTG ATGACCGGTC ACGGCCCCGG CATCCTGACC
CTGATGACCG CGCGGGGCGG AGAGATTGAT TTCACCATTG ATGCCTCCGC CAATCTTGCC
ACCCTCCTCG ACCTCGGAGC CTGA
|
|---|
| Protein sequence | MPSLKTNEDA LVEMAVSGVI TTPAVRPGQY IPYPDGTATV LPGMYGITYN VRCGDRAFGW
AGDHVEPGVS IDDDADAGRH HALHYLNCIG NEALVTSGMA AGARGIVVGE HARILVQFDA
DAHDVMAPGD RIQVMTKGQG LTLTDYPGVA LKKMSPRLFH ALGITESDGR LHVSVAMELP
IRIMGSGAEL NSEYVDQDLM SGDRALMAEL GIDQMRLGDV IAIRHADHHW GRSYREGAVS
ICLCIHGDSV MTGHGPGILT LMTARGGEID FTIDASANLA TLLDLGA
|
|---|
| |