| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4116 |
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| Symbol | |
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| ID | 3936605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4223676 |
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| End bp | 4224587 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906502 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_512058 |
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| Protein GI | 89056607 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.795588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCG CCCGGGATCT TGCGGGGTAC GGGGCCCATC CTCCCGATAT CCGCTGGCCG
GGGGGCGCGG GACTGGCGGT AAATTTCGTG CTCAACGTCG AGGAAGGGTC CGAGTATTCC
ATCGCCGACG GCGATGGCCG ATCGGAGGCG GCGTTAAGCG AGGTCCGCGC CTCCCGCGTG
CCTCAGGGGG ACCGGGATCT GGCGGTTGAA TCGATCTATG AATACGGCAG CCGCGTGGGG
TTCTGGCGCA TTCATGACCT GTTCCGCGCG CGTAACCTGC CGCTCACGGT CTTCGCCAGT
GCATTGTCGC TGGAACGTAC CCCCGATGTC GCCGCCGCGA TTGCGGCCAC CGATTGGGAC
ATCTGCGCCC ACGGCTACCG CTGGATCGAA CACTACCATT TAGACCCTGA GGTTGAGGCC
GAGCAGATCG CCAAAGCCCA TGCCAGCCTG ACGCAAACCC TCGGGCGCGC ACCTGTGGGG
TACTATTGTC GCTATTCCGC CTCCACCGCG ACGCGGGGTC TGGTGGCGGC CCATGGCGGC
TTTTCCTACG ACAGCGATGC CTATAACGAC GACCTGCCCT ATTGGACTGA CGTCGACGGC
GCGCCGCATC TGGTGGTGCC CTACACGATG GTCACGAACG ACGCCAAGTT CCTGTCGGGT
GATGTGTTTC TGGGCCGGGA TTTCGGTGAC TTCCTGATCG ACAGCTTCGA TGTCCTGCAT
GCCGAGGCCA AGGCCAAACC GCGCATGATG TCGGTGGGCC TGCACAGCCG GATCATCGGC
CATCCGGGCC GTCTGGTGGG CCTGATGCGG TTCATGGATC ACATCGCGTG CCATCCCGAT
ATCTGGGTCT GTGGGCGCGA CCAGATTGCC GATCACTGGC GGATGAATGT GCCGCCAGGA
CCCTCTGCAT GA
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| Protein sequence | MNRARDLAGY GAHPPDIRWP GGAGLAVNFV LNVEEGSEYS IADGDGRSEA ALSEVRASRV
PQGDRDLAVE SIYEYGSRVG FWRIHDLFRA RNLPLTVFAS ALSLERTPDV AAAIAATDWD
ICAHGYRWIE HYHLDPEVEA EQIAKAHASL TQTLGRAPVG YYCRYSASTA TRGLVAAHGG
FSYDSDAYND DLPYWTDVDG APHLVVPYTM VTNDAKFLSG DVFLGRDFGD FLIDSFDVLH
AEAKAKPRMM SVGLHSRIIG HPGRLVGLMR FMDHIACHPD IWVCGRDQIA DHWRMNVPPG
PSA
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