Gene Jann_4097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4097 
Symbol 
ID3936586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4205654 
End bp4206817 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID637906483 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_512039 
Protein GI89056588 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.244199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.516922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC AGCCCTCCTT TTCGATCCTG CAACCCCGGG ACCTGACCTT TGGGCGGGGA 
TGCGCAGGCG ATGCTGTGTC CAAGGTCCTG GCATTGGGCA GTCGGGTGTT GCTGGTCCGG
GGCCGCTCCG CCCTCTGGTG CGACGTGTTC GCCGCTGACT TGCGACGCAG CGGGGCGGAC
ATCACGCAGG TGTACGGCAC CCGCGAACCT CACCTGACCG ACGTGACCGA TGCGGTCGAG
ATCGCCCGTG CCGCACGCTG CGACGTGATC GCAGGCGTGG GCGGCGGCAG TGTCATTGAC
CTCGCAAAGG CCATCGCCGC TTTGGTGCCT GCCCCGCACC CCGCGCAGGA CTATGTCACC
GGCGGCCGTC CCCTCGATGC GCCGCCCCTG CCGTTCATTG CCATCCCGAC CACCGCGGGC
ACCGGCGCTG AGGTGACCCG GAACGCCGTC ATTTGCGTGC CGGAACGGCG GCAAAAGATC
AGCCTGCGCG ATACGGCGAT GATCGCAGAC GTGGCGCTCG TTGATCCGGC GCTCACCGAT
GACACCCCCT TGAATGTCAC ATTCGGCTCG GGCCTTGACG CTTTGGTGCA GGTGATCGAG
CCATATTTGT CCAACCGCGC CAATGCCTAC ACCGATGCCC TGTGTCGCCA CGCCATCCCG
CTTGGCGTCC ACGCGCTCGC CAAGCTGGCG CAAGGGGAAA ACGCCCAAGC CCGAGATGAT
CTGGCCCTCG TCAGCCTCTT TGGCGGTCTG GCCCTGACCA ATGCCGGGCT GGGGGCCGTC
CATGGCCTCG CTGGCGTGAT TGGCGGACGG GTCCCGGACG TGCCGCACGG CCTCCTCTGC
GGTCGCCTTC TGTGTGCGAC GCTTCAGGTG AACATGGAGC AGCGGCGCTC CCAGGGGCTG
GATCAGGATC GCCACAATGA AGTGCTGTCG TGGTTGGCAG AGATCACGCC GACGCGCCAA
GGCGACCTGG CCCAGATTGC CAGGGTCCTC AACGATTGGG GCGTGCCGAA GTTGGCTTTT
CTGACGGATC TACCCGAGGC GGAGGTGCCC GCCATCACAT CGGATGCGCT CACATCCTCA
TCCATGGGTG CGAATGGGAC GCCGCTTACG CAATCGGACC TCGCACGCAT CCTCACGCTG
TCGGCCGCGT TTCAGGAGGT GTGA
 
Protein sequence
MTTQPSFSIL QPRDLTFGRG CAGDAVSKVL ALGSRVLLVR GRSALWCDVF AADLRRSGAD 
ITQVYGTREP HLTDVTDAVE IARAARCDVI AGVGGGSVID LAKAIAALVP APHPAQDYVT
GGRPLDAPPL PFIAIPTTAG TGAEVTRNAV ICVPERRQKI SLRDTAMIAD VALVDPALTD
DTPLNVTFGS GLDALVQVIE PYLSNRANAY TDALCRHAIP LGVHALAKLA QGENAQARDD
LALVSLFGGL ALTNAGLGAV HGLAGVIGGR VPDVPHGLLC GRLLCATLQV NMEQRRSQGL
DQDRHNEVLS WLAEITPTRQ GDLAQIARVL NDWGVPKLAF LTDLPEAEVP AITSDALTSS
SMGANGTPLT QSDLARILTL SAAFQEV