| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4080 |
|---|
| Symbol | |
|---|
| ID | 3936568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 4185394 |
|---|
| End bp | 4186473 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637906465 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_512022 |
|---|
| Protein GI | 89056571 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.290572 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGG CGCCCATGTC CCTGACCATC CTCGGAATTG AGAGCAGTTG CGACGACACC
GCCGCCGCTA TCCTGCGCGG CCCTGGCGAT GACGTGGCGA TCCTGTCCAG CGTGGTCTCC
TCCCAAACCG ATCTGCACGC GGCGTTCGGC GGTGTGGTGC CCGAGATTGC AGCGCGTGCC
CATGCCGAGA CGCTGGATCT GGTGGTGGAG GAGGCGATGG CGACCGCGGG CATTGCCCTG
TCCGATGTGG ATGCCATCGC CGTCACGGCG GGCCCGGGTC TGATCGGCGG CGTCTTGTCC
GGTGTGATGG CGGCCAAGGG CCTGGCTCTT GGTCTGGGTA AGCCGTTGAT CGGTGTCAAT
CATCTGGCGG GCCACGCCCT GACCCCGCGC CTGACCGACG GGCTGGCGTT TCCCTATCTG
TTGTTGTTGG TTTCCGGCGG CCACTGCCAG TTCCTGCGCG TGGAGGGGCC GGAGCGTTTC
GTGCGCCTGG GCGGCACAAT CGACGATGCC CCGGGGGAGG CGTTCGATAA GGTCGCCCGT
CTTCTGGGCC TGCCGCAACC CGGTGGGCCA TCCGTGGAAC GGGCTGCGCT GGCAGGCGAT
GCCACCCGGT TCAAACTGCC GCGTCCTTTG CTGGATCGGC CCGGATGTGA CCTCAGCTTC
TCGGGCCTGA AAACCGCTGT CCTGCGCCTG CGTGACGGAT TGGTGGAGGC AAACGGCGGC
CTGACGGAGC AGGATCGCGC CGATATCTGC GCCTCCTTCC AGGCCGTTGT CGCCTCCGTG
CTGGCCGAAA AGTCCCGCCG CGCACTGGCC TTGGGCGATG TCACCGCCTT CGCCGTTGCG
GGCGGCGTGG CGGCCAATCA GGTCCTGCGC GCGGCGTTGG AAGAGGTCAC GGACCTGCCC
TTCGCCGCCC CGCCTCTGGC GCTCTGCACC GACAATGCGG CGATAATCGC TTACGCAGGC
CTGCTGGCCT TTGAAGGCGG ACGGGTGGAT GACATGACCC TGTCGGCCCG GCCCCGCTGG
CCGCTGGATG CCACCGCCGC ACCAATGATC GGGTCCGGCA AGAAAGGGGC CAAGGCATGA
|
|---|
| Protein sequence | MRAAPMSLTI LGIESSCDDT AAAILRGPGD DVAILSSVVS SQTDLHAAFG GVVPEIAARA
HAETLDLVVE EAMATAGIAL SDVDAIAVTA GPGLIGGVLS GVMAAKGLAL GLGKPLIGVN
HLAGHALTPR LTDGLAFPYL LLLVSGGHCQ FLRVEGPERF VRLGGTIDDA PGEAFDKVAR
LLGLPQPGGP SVERAALAGD ATRFKLPRPL LDRPGCDLSF SGLKTAVLRL RDGLVEANGG
LTEQDRADIC ASFQAVVASV LAEKSRRALA LGDVTAFAVA GGVAANQVLR AALEEVTDLP
FAAPPLALCT DNAAIIAYAG LLAFEGGRVD DMTLSARPRW PLDATAAPMI GSGKKGAKA
|
|---|
| |