| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4079 |
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| Symbol | gpsA |
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| ID | 3936567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4184474 |
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| End bp | 4185397 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637906464 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_512021 |
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| Protein GI | 89056570 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.261493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTGG ATGTGATCGG GGCCGGGGCG TTCGGGGCGG GTCTTGCGAT TGCCTACGCG
CGTGCGGGCC TTGACGTGAC CCTTTGGGCC CGGGATGTGG CGGGGTTGCG CGGCGGGGAA
AGTCCCCGGC TGCCCGGTCA CGCGTTCCCC GATGGTCTGC ATGTGACCGG AGACCTGAGC
GCGTGCACCG CCGATGTCGC GTTGATCGCG ATCCCGACCC AGAGCATCGC GGGCTTCGTC
GCCAAGGGCG GGCTGGCCCC CCGCGTCGCG GTGTCCTGCG CCAAGGGGAT CGACCGCTCC
TCGGGCCATG GTCCCACGGC CCTCCTCGCC GCATTGGCCC CCTGCACGGC GCAGCTCACC
GGTCCCAGTT TTGCCGCCGA CATCGCACGC GGGCTGCCGA CGGCGCTGAC GATTGCCTGC
GCCGATGCGG CGGAGGGGGC GGCGCTGCAG AATGCCCTCA GCACGCCCAC CCTCCGGCTT
TACACCACGC AGGATGTCAT CGGGGCGGAA CTTGGTGGCG CGTTGAAAAA CGTCATCGCC
ATCGCGGCGG GGGCGGTCAT CGGCAAGGGC CTGGGCGACA GCGCGCGTGC CGCCCTCATC
GCGCGGGGCT TCGCCGAGAT GACGCGCTAC GCCACCGCCA AGGGCGCGCT GCCCGAGACG
CTGACGGGCC TGTCCGGCCT TGGGGACCTG ATCCTTACCT GCGGCTCCGC CCAATCGCGC
AACTTCCGCT TCGGCCATGC ACTTGCCACG GGCGACCGCC TGCCCGAAGG CACCACCGTG
GAGGGCCTGC ACACGGCCCG GCAACTGGCC GCCTCGCCCG AGGACACGCC GATTGCCGAT
ACGGTCGCGG CGCTGGCGGA CGGCACCCTC GACATTGACG GCGCGCTCAG CCACCTTCTG
TCTCGCCCCC TCAAACCGGA GTAA
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| Protein sequence | MKLDVIGAGA FGAGLAIAYA RAGLDVTLWA RDVAGLRGGE SPRLPGHAFP DGLHVTGDLS
ACTADVALIA IPTQSIAGFV AKGGLAPRVA VSCAKGIDRS SGHGPTALLA ALAPCTAQLT
GPSFAADIAR GLPTALTIAC ADAAEGAALQ NALSTPTLRL YTTQDVIGAE LGGALKNVIA
IAAGAVIGKG LGDSARAALI ARGFAEMTRY ATAKGALPET LTGLSGLGDL ILTCGSAQSR
NFRFGHALAT GDRLPEGTTV EGLHTARQLA ASPEDTPIAD TVAALADGTL DIDGALSHLL
SRPLKPE
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