Gene Jann_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4076 
Symbol 
ID3936564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4183328 
End bp4183756 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID637906461 
Productputative secreted protein 
Protein accessionYP_512018 
Protein GI89056567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.215347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTTC TTCCAACTCT GGCCCTCTGC ATGGGCCTTG CAGGCCTTGG CGGGATCACC 
CCCCCGGCCG AGGCCCAGAC CACCGCAACC GCCATTGCCT CCGGCCAATT CCAGGACACA
GGCCCGCGCT ACCAGGGGTC CGGCTCAGCG GTGATCGCGC AAACATCTGA CGGGCAGACG
GTGCTGCAAT TCGGTGACTT CTCTGTCACA CCGGGCCCGG ATCTGGAGGT TTGGCTGGTC
GAGGCCGACG CGCCCACAAG CGCCGCGGCG GTGCTGGCCA GCAGCTATAT CTCGCTGGGG
CCGCTGCAAT CCGCAACGGG AGGGCAAACG TATGGCATCC CGTCCGATAT CGACGCCTCC
GCCTATGGCA GCGTGGTGAT CTGGTGCGAA GATTTCAGCG TGCTGTTCTC CGTCGCGCCG
CTGCGCTGA
 
Protein sequence
MRFLPTLALC MGLAGLGGIT PPAEAQTTAT AIASGQFQDT GPRYQGSGSA VIAQTSDGQT 
VLQFGDFSVT PGPDLEVWLV EADAPTSAAA VLASSYISLG PLQSATGGQT YGIPSDIDAS
AYGSVVIWCE DFSVLFSVAP LR