Gene Jann_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4072 
Symbol 
ID3936560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4179162 
End bp4179641 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID637906457 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_512014 
Protein GI89056563 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.232011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCC GCCCCGCCCA TGACCTCGAC GCCGGTGAAG TCGCGGCACT CTTGCGGGAG 
ATCGTCGCCA TCGGCGGCAC CACCGCGATC ACCGGGCATG TCAGCCGCGA AGACATCCTT
GGATGGATGA GCCGCCCGAA GGGCGCCTGG CATGTGGCCG AAACGGAGGA AGGGGAGATC
CTAGGCTTCC AGTATATCGC CCCGGGGGCA AGCTACCTGC CGCCGGAGGC CGCCGAGATC
GCGACCTTCG CCATGCCCGG CAAACAGGGC CTCGGCATCG GCTCCAGGCT GTTTGAGGCC
ACGCGCCTGG TCGCCAAGGA GCTCGGCTAT CTCTGGATCA ACGCCAATAT CCGCGCCGAC
AACGACAGCG GTCTGGCGTA TTATCAGTCA CGCGGGTTTG AGGATTACGG GACGATCGAG
GGCTATCAGA TGGCCGACGG AACCACCGTC GACAAGATCC TCAAACGCCT CGATCTCTAG
 
Protein sequence
MIIRPAHDLD AGEVAALLRE IVAIGGTTAI TGHVSREDIL GWMSRPKGAW HVAETEEGEI 
LGFQYIAPGA SYLPPEAAEI ATFAMPGKQG LGIGSRLFEA TRLVAKELGY LWINANIRAD
NDSGLAYYQS RGFEDYGTIE GYQMADGTTV DKILKRLDL