| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4061 |
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| Symbol | |
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| ID | 3936549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4165893 |
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| End bp | 4167542 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637906446 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_512003 |
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| Protein GI | 89056552 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.313546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACAACG CCACGACGCT GATCTTCATC GCGATCACCT TTGCAACCGC GGCCCTGGCG
GTTCTTTTGA CGACGCGCCT CCTCTCCAAC CGAACCGCTC CGTCCATGGC CTCCGCGCAG
GCCTCTGGCC GTGGCAGCGG CACCGACGTG TTGCGCCGTT ATCAGTTTCG GGAGGGGTAT
CTGCTCTCCG ATGTGGATAT GGACGACGCG TTTCTGGAGG CTGGCGTGGA TCGCACCGTC
GCCTTCCGGC GCCTCGTCTC GGCCCTGACA CCGTTGAGCC CTGAACTGAC CAAGCGCCTT
GCGGGATTGC GCGATCGCGG CGATGCGTTT CTGGTGGACG GGCGCATCGG CTCTGACCCG
GTCTTTATCG CCGGTCGGAT CGAGGAGGAG GATGTTCTGA CCCTCTCCGT CGGGCCGGCG
GGGGATGGCG CGGGGCGTCA GACGGTGGAA ACCGCCACGC TCAACGCCCT TCAGACGGAA
CTTCTGGATC TGCGCGCCGC CCTGGATTGC GGCGTCGTCC CGATGTGGCG TGAAGACGAC
CAGGGCCATG TGACCTGGGC CAACGCCCCA TATTTTGAGC TGGTGGAGCG CCTGCGCGGA
GGCCAGGCCG CCGGGTGGCC CCTGCCAAGG ATTTTCGCCG CAGGACTCGA TCAGATCCCG
ACCGAGGGGA CGATCAGCCG CTGCAAGCTG GAGATGCCCG ACCGGGACGA GCCGACGTGG
TACGAGGTCA GCCGCGATCA CCTGCCCGGT GGTCTGTCGC TGTTTACCGC CCAGCCCGCC
GACCGCTTGG TGCGCGCCGA AACCGGCCTG CGGGAGTTTC TGCAAACCAC CACCAAGACC
TTCGCCGCCC TGCCCGTGGG CCTTGCCGTC TTTGACCGCA AGCGCCAGTT GGTGACGTTC
AATCCCGCCC TTGTTGCGCT GACCCAGGCG GGCGCGCAAT TTCTGTCGCA GCGCCCCGAC
CTGCGCTCCT TCCTGGACCA GTTGCGCGAG AAGAAGCGCA TGCCTGAGCC GCGCGATTAC
CTCAGCTGGC GCAATGAGAT CGCGCAGTTG GAAGAAGGCG CGGAGAACGG CACCTATCGC
CAGCTTTGGG AATTGCCCGA GGGCAAGACC TTCCGCGTCA TGGGCCGCCC CCACCCCGAC
GGCGCGATTG CCTTCATGTT CGAGGATATC AGCGCCGAGG TCTCCCTCAC CCGCCAGTTC
CGCGCGGATC TGGAGATGTT TCAGGCCGTA CTGGATGCTG TGCCCGCCGC CATTGCCGTG
TTCCAGGCCG ACGGCGCGAT GATCGGCGCG AATGAGGGAT ATGGTCAGCT TTGGGGGCAG
GATCCGCAAG TGCTCGCGCA GATGCCGCAC CTCAGCCAGG CCTGTACCGA TTGGGCCGAG
GGCTGCAAAC CCAGCCAGGT GTGGAGCGAA ATCCGGCAAT TCGTCGGCCA CGAGGTCGAC
CGCGCGCCCT GGGTGCAGGA GATTGAGACC AAGGATGGAT TGCGACTTGC CGTGCGCATG
GCGGCGACGC GGGGGCGGGC CACGGTCATC CAATTCCTGC CGCTTGATGT CAGCCTGTCC
GACCCGCTCG CAGATTTCGG GGCCGCCGCA ACGCCGCTTC TGGATGCCGC TCGCGCCCAC
ATGGATGAGG GTGCGAAACG CCACGCGTAG
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| Protein sequence | MDNATTLIFI AITFATAALA VLLTTRLLSN RTAPSMASAQ ASGRGSGTDV LRRYQFREGY
LLSDVDMDDA FLEAGVDRTV AFRRLVSALT PLSPELTKRL AGLRDRGDAF LVDGRIGSDP
VFIAGRIEEE DVLTLSVGPA GDGAGRQTVE TATLNALQTE LLDLRAALDC GVVPMWREDD
QGHVTWANAP YFELVERLRG GQAAGWPLPR IFAAGLDQIP TEGTISRCKL EMPDRDEPTW
YEVSRDHLPG GLSLFTAQPA DRLVRAETGL REFLQTTTKT FAALPVGLAV FDRKRQLVTF
NPALVALTQA GAQFLSQRPD LRSFLDQLRE KKRMPEPRDY LSWRNEIAQL EEGAENGTYR
QLWELPEGKT FRVMGRPHPD GAIAFMFEDI SAEVSLTRQF RADLEMFQAV LDAVPAAIAV
FQADGAMIGA NEGYGQLWGQ DPQVLAQMPH LSQACTDWAE GCKPSQVWSE IRQFVGHEVD
RAPWVQEIET KDGLRLAVRM AATRGRATVI QFLPLDVSLS DPLADFGAAA TPLLDAARAH
MDEGAKRHA
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