| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4057 |
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| Symbol | |
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| ID | 3936545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4161692 |
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| End bp | 4162999 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906442 |
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| Product | ammonium transporter |
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| Protein accession | YP_511999 |
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| Protein GI | 89056548 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.211238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA AGTATCTTCT TCCACTCTTG GCGGCTGCGA CCATCGCGCT TCCAACCGTG
GCGGCGGCCC AGGATGAGGC CGCACTGCAC ACCTCCTACA TCCTCACCAC GCTGCTGTTT
CTTGTCGGTG GCTTTCTGGT GTTCTGGATG GCGGCGGGCT TCGCGATGCT GGAGGCCGGT
CTTGTCCGCT CCAAGAACGT CGCGATGCAG CTGACCAAGA ACATCGCGCT CTTTTCCATC
GCGGCGATCA TGTATTGGCT GGTGGGGTTT GGCATCATGT ACCCCGCCGA TTGGCTGGTC
GAAGGCTGGC TGGGGCCGTT CTTCGCCATC ACGTCGCTGG AGCCTGTGGG CCTCGCCGAT
ACGGAAACCG CGCTGGATTA TGCCTCCGTC GGCTCCGACT TCTTCTTCCA GCTGATGTTC
TGCGCCACCA CAGCCTCCAT CGTGTCGGGC ACATTGGCCG AGCGGATCAA GCTCTGGCCC
TTCCTGATTT TCGTGGTCGT GCTGACCGGC TTCATCTATC CCATCGAGGC CTCCTGGCAG
TGGGGCGGCG GCTGGTTGTC TGAAGCGGGC TTCTCCGACT TCGCAGGCTC CACGCTCGTT
CACGCCGCTG GTGGCTTCGC CGCGTTGGCC GGTGCCATCG TGCTGGGTCC CCGTCTGGGC
AAGTACAAGG ATGGTCGCGT CAACCCGATG CCCGGCTCGA ACCTTGCCTT GGCGACCTTG
GGTACGTTCA TCCTGTGGCT CGGCTGGTTC GGCTTCAACG GCGGCTCGCA GCTGGCGATG
GGCACAATCG GCGACGTCGC GGACGTCTCC CGCATCTTCG CCAACACCAA CATGGCCGCC
GCCTCCGGTG CGGTTGCTGC ACTCATTCTG ACGCAGGTCA TGTACGGCAA GGTCGACCTG
ACGATGGTGT TGAACGGTGC CCTGGCGGGC CTTGTGTCGA TCACGGCTGA ACCTTTGGCG
CCGTCGCTTT TCGGCGCGCT ACTGACCGGC GCGGTCGGTG GCCTGATCGT CGTCTTCACG
GTGCCGCTGC TGGACAAGCT GAAGATCGAC GACGTCGTCG GTGCCATCCC GGTTCACCTC
TTTGCAGGGG TCTGGGGCAC GCTTGCGGTG GCCTTCTACA CCGGCAATTG GGGCGCACAG
ATCCTTGGCA TCGCAGCCAT CGGCATCTTC GTTTTCGTCA CCTCGCTGGT GGTCTGGTTC
ATCCTCAAGG CGACCGTGGG CATCCGCGTC GGCGAGGAGG AGGAGATCAA CGGCCTCGAC
GTGGCGGAAT TGGGAATGGA AGCCTACCCC GAGTTCTCCA AGGGCTAA
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| Protein sequence | MQNKYLLPLL AAATIALPTV AAAQDEAALH TSYILTTLLF LVGGFLVFWM AAGFAMLEAG
LVRSKNVAMQ LTKNIALFSI AAIMYWLVGF GIMYPADWLV EGWLGPFFAI TSLEPVGLAD
TETALDYASV GSDFFFQLMF CATTASIVSG TLAERIKLWP FLIFVVVLTG FIYPIEASWQ
WGGGWLSEAG FSDFAGSTLV HAAGGFAALA GAIVLGPRLG KYKDGRVNPM PGSNLALATL
GTFILWLGWF GFNGGSQLAM GTIGDVADVS RIFANTNMAA ASGAVAALIL TQVMYGKVDL
TMVLNGALAG LVSITAEPLA PSLFGALLTG AVGGLIVVFT VPLLDKLKID DVVGAIPVHL
FAGVWGTLAV AFYTGNWGAQ ILGIAAIGIF VFVTSLVVWF ILKATVGIRV GEEEEINGLD
VAELGMEAYP EFSKG
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