Gene Jann_4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4055 
Symbol 
ID3936543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4158783 
End bp4161017 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content65% 
IMG OID637906440 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_511997 
Protein GI89056546 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTT CTGGCAATCG CAGACGGCCC CTAGTGGCCG ACCGACGCAA GTCCACGTCC 
ACCAAACGCA AGGGGAGTGG CGGCAGCGGG GGGGGCGGCG GGCGCAGGCC TGCGAAACGC
AAGACAACCC GGCGGAAAAA GGCTCAGCGC GGCGGGTTTC TGGCCCGCAG CTTCCGGTTT
ATCGGACGCC TGATCTGGGG CGTGATCTGG CGCAGTGCTG CCGTGGTCAC GCTGATCCTG
GCGCTGGCGA CGGGGTATTA CTTCGCACAA CTGCCTGATG TGACAGAGCT TCTGGACGCG
CGTCAGCGGG GGTCGGTCAC CATGCTGGAC CGACATGGGG AGGTCTTTGC CTGGCGCGGG
GAACAATTCG GCGGGGCGAT TACGCCCGAC ACGGCGTCCC CGCATCTGGT GAACGCCGTT
GTTGCCACGG AGGACCGGCG CTTCTGGCGG CATCTTGGCA TCTCTCCGCG CGGGATCGCC
TCGGCGATCC GCATCAACCT GAGCGAGGGG CGCGGGCCGC TGTCGGGCCA TGGCGGGTCC
ACGATCACGC AGCAGGTTGC AAAACTTCTG TGTCTGGGGC GGGGATACGA CCCGGAGGAA
TATGAAACAG AGGCCGAGTA CGAGCAGGAT TGCCGCCGCA CGACGCTGTG GCGCAAGATC
CAGGAAGTGC CGTTCAGCTT CGCGATGGAG CTGCGCTATT CCAAGGCCGA AATCTTGTCG
GTCTACCTGA ACCGCGCCTA TCTGGGTGCG GGCGCGCGCG GGTTTGAGGC CGCCTCCCAG
CGCTATTTCG GGATTGCCTC GTCCGAGGTG GACCCGCAGC AATCGGCCAT GTTGGCGGGG
CTTCTCTCCG CGCCGTCATA TTATGCGCCG ACCCGGGATC TACAGCGGTC GCAGGAGCGG
GCCAATGTGG TGCTGAACTT GATGGAGCGT CAGGGCTATC TGAGCGCCAG TGCCGCTGAC
AGCGCCCGCG CCAACCCGGC CACTCTGTCA TCCGCCGCGC GCCAGGACAC CGGCGGCTAT
TTCGCCGATT GGATCATGTC CGTGGGGCCT GATTTCCTGA CCGGCGACAC CACCGAAGAT
GTGATCATCC GCACCACGTT TGACCCTGCG ATCCAGGCGG CGGCGGAGGC ATCTATTGCC
AACGTCTTCG CTGAACAGGT CCGCGCGGGA TCAGAGGCCG AGGCCGCGAT TGTCGTGATG
AGCGCCGATG GTGCCGTGCG CGCCATGGTT GGCGGTCGTG ATCTGGCGGG TGGCGGCCTG
TTCAATCGCG CCACGCAGGC GCTGCGCCAG CCGGGATCTG CCTTCAAGCC CTTCGTCTAT
GCCACCGCGC TGGATCTGGG CTGGCGGTTC GATGACATGG TGCTGGATGC CGAACTTTGC
ATCGACGTCG CCGGATCAGG CCCCTATTGC CCGGAAAACT ACACCAACCA GTTCTACGGC
ATGGTGACCC TGACGGAGGC GTTGCAAAGC TCGCTCAACA CCGCAGCCGT GCGCATGTCC
GAAGAAGTGG GCCGCGATCT GGTGCGCACT GTCGCCAGCC AGTTCGGGAT TGAATCGGAT
TTGGCCGCTG GACCGGCCCT CGCACTTGGC GCGTCAGAAT CGACCCTGAT CGAGATGACG
GGGGCCTATG CGGGCATCCT GAATGGCGGC TCTGCCGTGC TGCCCTACGG TATGACAGAG
CTGCGGCTTC TGGGCGAAGA TGCCCCGATG TTCGAGCAGG AAACCGGTAT CCGCGAACGT
GTGATCGCCG AATCCTCGGC CCGGCAGTTG ATCTATATGA TGAGCCGCGT CGTGGCCGAA
GGGTCCGGCC AGCGCGCCGC CCTGCCGGAC CGGCCCGTGG CAGGCAAGAC CGGCACGACG
AACAGCGCGC GCGATGCGTG GTTCGTGGGG TTCACCGCGG ATTACGTGGC CGGCGTCTGG
ATGGGCTACG ACGACAACCG CCCGCTATCC GGCGTGACAG GCGGCGGCCT GCCGTCGGAG
ATCTGGCGTC AGGCGATGGA GCAGATCCAC GCCGACATCG CCCCGCGCCC CCTGCCGATG
ATCGACCCGA TTGCCGAGGC CGGGCGCGGC CAACGGGGTG GGGCTGCTGA CGACAACCCC
TTCTTCGTGG ACAACGGCAT TTTGCGCGGA CCAGTGACGC CCGAGGGCAC GCGGATCCCG
ATCAATAACG GGCAAGGCGA CATCGGTAAC GCGGTCAACA ACCTGCTTGG TCGGATCTTC
GGCCCCAGGC AATAA
 
Protein sequence
MSPSGNRRRP LVADRRKSTS TKRKGSGGSG GGGGRRPAKR KTTRRKKAQR GGFLARSFRF 
IGRLIWGVIW RSAAVVTLIL ALATGYYFAQ LPDVTELLDA RQRGSVTMLD RHGEVFAWRG
EQFGGAITPD TASPHLVNAV VATEDRRFWR HLGISPRGIA SAIRINLSEG RGPLSGHGGS
TITQQVAKLL CLGRGYDPEE YETEAEYEQD CRRTTLWRKI QEVPFSFAME LRYSKAEILS
VYLNRAYLGA GARGFEAASQ RYFGIASSEV DPQQSAMLAG LLSAPSYYAP TRDLQRSQER
ANVVLNLMER QGYLSASAAD SARANPATLS SAARQDTGGY FADWIMSVGP DFLTGDTTED
VIIRTTFDPA IQAAAEASIA NVFAEQVRAG SEAEAAIVVM SADGAVRAMV GGRDLAGGGL
FNRATQALRQ PGSAFKPFVY ATALDLGWRF DDMVLDAELC IDVAGSGPYC PENYTNQFYG
MVTLTEALQS SLNTAAVRMS EEVGRDLVRT VASQFGIESD LAAGPALALG ASESTLIEMT
GAYAGILNGG SAVLPYGMTE LRLLGEDAPM FEQETGIRER VIAESSARQL IYMMSRVVAE
GSGQRAALPD RPVAGKTGTT NSARDAWFVG FTADYVAGVW MGYDDNRPLS GVTGGGLPSE
IWRQAMEQIH ADIAPRPLPM IDPIAEAGRG QRGGAADDNP FFVDNGILRG PVTPEGTRIP
INNGQGDIGN AVNNLLGRIF GPRQ