Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4055 |
Symbol | |
ID | 3936543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4158783 |
End bp | 4161017 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637906440 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_511997 |
Protein GI | 89056546 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCCTT CTGGCAATCG CAGACGGCCC CTAGTGGCCG ACCGACGCAA GTCCACGTCC ACCAAACGCA AGGGGAGTGG CGGCAGCGGG GGGGGCGGCG GGCGCAGGCC TGCGAAACGC AAGACAACCC GGCGGAAAAA GGCTCAGCGC GGCGGGTTTC TGGCCCGCAG CTTCCGGTTT ATCGGACGCC TGATCTGGGG CGTGATCTGG CGCAGTGCTG CCGTGGTCAC GCTGATCCTG GCGCTGGCGA CGGGGTATTA CTTCGCACAA CTGCCTGATG TGACAGAGCT TCTGGACGCG CGTCAGCGGG GGTCGGTCAC CATGCTGGAC CGACATGGGG AGGTCTTTGC CTGGCGCGGG GAACAATTCG GCGGGGCGAT TACGCCCGAC ACGGCGTCCC CGCATCTGGT GAACGCCGTT GTTGCCACGG AGGACCGGCG CTTCTGGCGG CATCTTGGCA TCTCTCCGCG CGGGATCGCC TCGGCGATCC GCATCAACCT GAGCGAGGGG CGCGGGCCGC TGTCGGGCCA TGGCGGGTCC ACGATCACGC AGCAGGTTGC AAAACTTCTG TGTCTGGGGC GGGGATACGA CCCGGAGGAA TATGAAACAG AGGCCGAGTA CGAGCAGGAT TGCCGCCGCA CGACGCTGTG GCGCAAGATC CAGGAAGTGC CGTTCAGCTT CGCGATGGAG CTGCGCTATT CCAAGGCCGA AATCTTGTCG GTCTACCTGA ACCGCGCCTA TCTGGGTGCG GGCGCGCGCG GGTTTGAGGC CGCCTCCCAG CGCTATTTCG GGATTGCCTC GTCCGAGGTG GACCCGCAGC AATCGGCCAT GTTGGCGGGG CTTCTCTCCG CGCCGTCATA TTATGCGCCG ACCCGGGATC TACAGCGGTC GCAGGAGCGG GCCAATGTGG TGCTGAACTT GATGGAGCGT CAGGGCTATC TGAGCGCCAG TGCCGCTGAC AGCGCCCGCG CCAACCCGGC CACTCTGTCA TCCGCCGCGC GCCAGGACAC CGGCGGCTAT TTCGCCGATT GGATCATGTC CGTGGGGCCT GATTTCCTGA CCGGCGACAC CACCGAAGAT GTGATCATCC GCACCACGTT TGACCCTGCG ATCCAGGCGG CGGCGGAGGC ATCTATTGCC AACGTCTTCG CTGAACAGGT CCGCGCGGGA TCAGAGGCCG AGGCCGCGAT TGTCGTGATG AGCGCCGATG GTGCCGTGCG CGCCATGGTT GGCGGTCGTG ATCTGGCGGG TGGCGGCCTG TTCAATCGCG CCACGCAGGC GCTGCGCCAG CCGGGATCTG CCTTCAAGCC CTTCGTCTAT GCCACCGCGC TGGATCTGGG CTGGCGGTTC GATGACATGG TGCTGGATGC CGAACTTTGC ATCGACGTCG CCGGATCAGG CCCCTATTGC CCGGAAAACT ACACCAACCA GTTCTACGGC ATGGTGACCC TGACGGAGGC GTTGCAAAGC TCGCTCAACA CCGCAGCCGT GCGCATGTCC GAAGAAGTGG GCCGCGATCT GGTGCGCACT GTCGCCAGCC AGTTCGGGAT TGAATCGGAT TTGGCCGCTG GACCGGCCCT CGCACTTGGC GCGTCAGAAT CGACCCTGAT CGAGATGACG GGGGCCTATG CGGGCATCCT GAATGGCGGC TCTGCCGTGC TGCCCTACGG TATGACAGAG CTGCGGCTTC TGGGCGAAGA TGCCCCGATG TTCGAGCAGG AAACCGGTAT CCGCGAACGT GTGATCGCCG AATCCTCGGC CCGGCAGTTG ATCTATATGA TGAGCCGCGT CGTGGCCGAA GGGTCCGGCC AGCGCGCCGC CCTGCCGGAC CGGCCCGTGG CAGGCAAGAC CGGCACGACG AACAGCGCGC GCGATGCGTG GTTCGTGGGG TTCACCGCGG ATTACGTGGC CGGCGTCTGG ATGGGCTACG ACGACAACCG CCCGCTATCC GGCGTGACAG GCGGCGGCCT GCCGTCGGAG ATCTGGCGTC AGGCGATGGA GCAGATCCAC GCCGACATCG CCCCGCGCCC CCTGCCGATG ATCGACCCGA TTGCCGAGGC CGGGCGCGGC CAACGGGGTG GGGCTGCTGA CGACAACCCC TTCTTCGTGG ACAACGGCAT TTTGCGCGGA CCAGTGACGC CCGAGGGCAC GCGGATCCCG ATCAATAACG GGCAAGGCGA CATCGGTAAC GCGGTCAACA ACCTGCTTGG TCGGATCTTC GGCCCCAGGC AATAA
|
Protein sequence | MSPSGNRRRP LVADRRKSTS TKRKGSGGSG GGGGRRPAKR KTTRRKKAQR GGFLARSFRF IGRLIWGVIW RSAAVVTLIL ALATGYYFAQ LPDVTELLDA RQRGSVTMLD RHGEVFAWRG EQFGGAITPD TASPHLVNAV VATEDRRFWR HLGISPRGIA SAIRINLSEG RGPLSGHGGS TITQQVAKLL CLGRGYDPEE YETEAEYEQD CRRTTLWRKI QEVPFSFAME LRYSKAEILS VYLNRAYLGA GARGFEAASQ RYFGIASSEV DPQQSAMLAG LLSAPSYYAP TRDLQRSQER ANVVLNLMER QGYLSASAAD SARANPATLS SAARQDTGGY FADWIMSVGP DFLTGDTTED VIIRTTFDPA IQAAAEASIA NVFAEQVRAG SEAEAAIVVM SADGAVRAMV GGRDLAGGGL FNRATQALRQ PGSAFKPFVY ATALDLGWRF DDMVLDAELC IDVAGSGPYC PENYTNQFYG MVTLTEALQS SLNTAAVRMS EEVGRDLVRT VASQFGIESD LAAGPALALG ASESTLIEMT GAYAGILNGG SAVLPYGMTE LRLLGEDAPM FEQETGIRER VIAESSARQL IYMMSRVVAE GSGQRAALPD RPVAGKTGTT NSARDAWFVG FTADYVAGVW MGYDDNRPLS GVTGGGLPSE IWRQAMEQIH ADIAPRPLPM IDPIAEAGRG QRGGAADDNP FFVDNGILRG PVTPEGTRIP INNGQGDIGN AVNNLLGRIF GPRQ
|
| |