Gene Jann_4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4046 
Symbol 
ID3936534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4149334 
End bp4150668 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content64% 
IMG OID637906431 
Productpeptidase M16-like 
Protein accessionYP_511988 
Protein GI89056537 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCTC GTTTCCTGAC GCCCTTCGTG GCCGCGCCCC TCTTGGCCGT GATGACCTTC 
ACCGCGCCCT CACAGGCAGA TATCATCGAC ATCCAGCCCG TCACGTCTGA GGGCGGGATC
GAGGCCTGGC TGGTCGAAGA CACCTCCATC CCCTTTGTGG CCATGGATTT CTGGTTTGCG
GGCGGCGGGT CGATTGATGC GCCGGGCGCG CGCGGGGCCA TTCACCTGAT GACGGCACTG
CTGGAAGAAG GCTCCGGCGA TCTAGACGCG GCCACCTTCG CGGAAGAACT GGAAGGCCTT
GCCGCATCCT TCGACTTTGA CATCTACCGG GATGACCTGG TGATTTCGGT GCAGATGCTG
ACCCAGAACC GCGACGAGGT ATTGGCCTTG CTGCGTGACG TTCTGACCGA ACCGCGCTTT
GACGAGGCCG CCGTGGAGCG GGTGCGCGGG CAGGTCCTGT CGATCCTGGA GGGGGACCTG
AATGACCCCG ATACGATTGC GGGCGTTCAG TTCAACGCGC TGGCGTTTGG CGATCATCCC
TATGCCAGCC GGCTGGAAGG CAGCCTGGAC AGCGTGGCGG CCCTGACCCG CGATGACCTC
TTTGCAGCCC ACCGCTCTGC GCTGGTGCGC GACCGGGTGT CCGTGGGTGT GGCGGGCGAC
ATGACCGCCG AGGATCTGGG TCCGATCCTG GATGCGCTTC TGGGTGATCT GCCCACCTCT
GACACGGATC TGCCCGGCGC GGCGGAGGTG TCGAATGAAG GTGGCATCAC CGTGATTGAC
TTCGCGACGC CGCAATCCTC CGTCTACTTC GGCCATGTGG GCATTGCGCG CGATGATCCG
GATTTCTTCG CGGCCTTTGT GGCCAACCAG ATCCTGGGCG GCGGCGGCTA TCGCTCTCGC
CTGATGGAGG AGGTCCGCGA ACAGCGCGGT CTGACCTATG GGATCAGCAC CTGGCTTGGC
CTCAGCAAGT CCGCACCGAT GATGCAGGGC GGGTTCTCAT CCTCCAACGG GTTGGTGGCC
CAGGCCATCG CGGTCATTGA AGACGAATGG GCCGACCTGG CGGAAAACGG CGTGACCCAG
GCCGAGCTGG ACGCCGCACA GCGCTATATG ACCGGGTCGT ATCCCCTGCG GTTTGACGGC
AACGGCACCA TCGCAGGCAT TCTTGCGGCG ATGCAGTCCG ATAACATGCC GCTGGATTAC
ATCGCCACGC GCAACGACAA CGTGCTGGCC GTGACCGTAG AGGATATTCA GCGGGTCGCG
GCAGACCTGG TCGACACGGA CGCCCTGCGC TTCGTGGTGG TGGGTCAGCC CGAGGGGCTT
GACGCGTCCA ACTGA
 
Protein sequence
MIARFLTPFV AAPLLAVMTF TAPSQADIID IQPVTSEGGI EAWLVEDTSI PFVAMDFWFA 
GGGSIDAPGA RGAIHLMTAL LEEGSGDLDA ATFAEELEGL AASFDFDIYR DDLVISVQML
TQNRDEVLAL LRDVLTEPRF DEAAVERVRG QVLSILEGDL NDPDTIAGVQ FNALAFGDHP
YASRLEGSLD SVAALTRDDL FAAHRSALVR DRVSVGVAGD MTAEDLGPIL DALLGDLPTS
DTDLPGAAEV SNEGGITVID FATPQSSVYF GHVGIARDDP DFFAAFVANQ ILGGGGYRSR
LMEEVREQRG LTYGISTWLG LSKSAPMMQG GFSSSNGLVA QAIAVIEDEW ADLAENGVTQ
AELDAAQRYM TGSYPLRFDG NGTIAGILAA MQSDNMPLDY IATRNDNVLA VTVEDIQRVA
ADLVDTDALR FVVVGQPEGL DASN