| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4045 |
|---|
| Symbol | |
|---|
| ID | 3936533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 4147946 |
|---|
| End bp | 4149337 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637906430 |
|---|
| Product | peptidase M16-like |
|---|
| Protein accession | YP_511987 |
|---|
| Protein GI | 89056536 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC CAATCCTCGC TTCAATGGGG CTTGCCGCCT TGGGCCTTAC CGCCCTCCCC
CTCCCGGCCA ACGCTGCCGG TGAAGTCACC GAATTCACCC TCGATAACGG CATGCAGGTC
GTTGTGATCG AAGACCATCG CGGGGCCGCT GTTACACATA TGGTGTGGTA TCGCGCGGGT
TCCGCCGATG AAATGCCAGG CCAGTCGGGC ATTGCGCATT TCCTGGAACA CCTGATGTTC
AAAGCGACCG ATGATCTGGA AAGTCGGGAG TTTTCGCGCA TCGTGGAAGA GAATGGCGGA
TCGGACAACG CCTTCACTTC GTGGGATTAC ACTGCCTATC ACCAACGCGT CTCCGCCGAC
CGTCTGGGCC TGATGATGAT GATGGAAGCC GACCGGATGC GCGATTTGGT CCTGGACGAG
GACGAGGTGC GCACCGAGCG GCAGGTCATT CTGGAGGAGC GGGCGCAACG CACGGACACC
TCCCCCGGGG CGCTGTTCAA TGAGCAGATG GCCGCCGCGA TCCACCTCAA CCATCCCTAT
GGTCGGCCAA TCATCGGCTG GCGGCACGAG ATGGAGGAAC TGAGCCTGCA AGACGCGCGC
GATTGGTACG AGACCCACTA CCACCCCAAT AACGCGATCC TGATCGTGGC CGGTGATGCC
GATCCCGATG AGGTCCGCGC CCTGGCCGAG GAGCATTACG GGCCGATCCC GGCGAACCCG
GACATCGAGC CGATGGAAGC CCGCGACCGC CCGTCCGAGC CGCCCCATAT TGCGGAGCGC
CGGGTGATCT ATGAAGATGC CCGCGTCTCC AACCCTTACG TGTCGATCAA CTTCCTCGCG
CCCGAGCGGA ACGCAGGCGA TCAGGAGGAG GCCGCAGCGC TGACGCTTCT GGCCGAGATC
CTGGCAGGCT CCGGCTTCAC CTCTGTGCTG CCGCGCGAGA TGCAGATCGA GGACGAACGC
TCCCTGTTCG TCGGCGCGTA TTACGGCGGC ACCAGCCTGG ATACGACAAC CTTCACGCTG
ATCAACATGC CCCTGCCCGG CACCCCGCTG GAAGAGGCCG AAGCCGAGAT TCTGGCCGAG
ATTGACGAGT TTCTGGAAGA GGGCATCGAC CCGGCTCAAT TCGAGCGGAT CCAGTTCCAG
ATCGACGCCG CCCGGATCTA TGAGGAGGAC GATGTGGAAG GTTTGGCCAG CGTCTATGGG
CGTGCCCTGA CCTCCGGCCT GACGGTCGCC GATGTGCAGG CCTGGCCCGA TATTCTCGCG
GCGACCACCG TCGACGATGT GATGGATGCC GCGCGCGACG TCTTCAGCCA GGGGGCCACG
ACGACGGGCT ATCTGTTGAG ACCCTCGGCC CCCGAAACCG ACACTGAAAC CGCTGGGGAG
GTCTCCCAAT GA
|
|---|
| Protein sequence | MIRPILASMG LAALGLTALP LPANAAGEVT EFTLDNGMQV VVIEDHRGAA VTHMVWYRAG
SADEMPGQSG IAHFLEHLMF KATDDLESRE FSRIVEENGG SDNAFTSWDY TAYHQRVSAD
RLGLMMMMEA DRMRDLVLDE DEVRTERQVI LEERAQRTDT SPGALFNEQM AAAIHLNHPY
GRPIIGWRHE MEELSLQDAR DWYETHYHPN NAILIVAGDA DPDEVRALAE EHYGPIPANP
DIEPMEARDR PSEPPHIAER RVIYEDARVS NPYVSINFLA PERNAGDQEE AAALTLLAEI
LAGSGFTSVL PREMQIEDER SLFVGAYYGG TSLDTTTFTL INMPLPGTPL EEAEAEILAE
IDEFLEEGID PAQFERIQFQ IDAARIYEED DVEGLASVYG RALTSGLTVA DVQAWPDILA
ATTVDDVMDA ARDVFSQGAT TTGYLLRPSA PETDTETAGE VSQ
|
|---|
| |