Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4042 |
Symbol | purH |
ID | 3936530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 4145097 |
End bp | 4146695 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637906427 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_511984 |
Protein GI | 89056533 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.809349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC CTGCCCCCCT CACCCGCGCG CTTCTGTCTG TCTCTGACAA GACCGGATTG ATTGAGTTCG CCACCGACCT GTCGTCCCGT GGGGTGGAGC TTCTGTCCAC CGGTGGCACC GCGAAGGCCT TGCGCGAAGC CGGTCTGGAT GTGCGCGATG TGAGCGAGGT CACGGGCTTC CCGGAGATGA TGGACGGACG GGTGAAGACA TTGCATCCGA TGATCCACGG CGGCCTGCTG GCCCTGCGCG ACAACGACGC CCATGTCGCG GCGATGAAAG AGCACGGGAT CGGCGCGATC GATCTGCTGG TGGTGAACCT TTACCCGTTT GAGGCGACGG TGGCCGCAGG CGCGGATTAT GACACCTGTA TCGAGAATAT CGATATCGGC GGCCCCGCGA TGATCCGGGC CGCCGCGAAA AACCATGGCG CGGTGACGGT GCTGACGGAC TCCTCCCAAT ACGCCGGGTT GTTGAGCGAG CTGGATGCTA ATGCAAACAA GGGCGGTGGC ACGTCGTTCC AGTTCCGCCA GCGGATGGCG CAGGCGGCTT ACGGGCGCAC GGCGGCCTAT GACGCGGCGG TCTCCAGTTG GATGGCAGGT GCGGCTGAGA TCAAAACTCC GCCACACCGC GCGTTCGCGG GCAGCCTCGC ACAGGAAATG CGCTACGGCG AGAACCCACA CCAGAAAGCC GCATTCTATC TTGATGGATC GTCGCGCCCG GGCGTGGCCA CAGCGCAGCA ACATCAGGGC AAAGCGCTGA GCTACAACAA CATCAATGAC ACGGACGCCG CGTTTGAGCT GGTCTCGGAA TTCGCGCCCG ACGATGGCCC GGCGGTTGCG ATCATCAAGC ACGCCAACCC GTCGGGCGTG GCCCGCGGCA ACAGCCTTGC AGAGGCCTAC AAAGCCGCGT TCGATTGCGA CCGCACCAGC GCGTTTGGTG GCATCGTCGC ATTGAACCAG ACGTTGGACG CTGCCACGGC AGAAGAGATC GTGCAGATCT TCACAGAGGT GGTGATCGCG CCCGACGCTG ACGAGGATGC CAAGGCGATC TTCGCCGCCA AGAAAAACCT GCGCCTGCTG ACAACCGGCG GCCTGCCGGA CCCGCGCGCG CCAATGGTCG CCTACAAGCA GGTCGCGGGC GGATTGTTGG TGCAGGACAA GGACACCGGC CATGTGGACC CGGAGTTGCT GGAGGTCGTG ACCAAACGCG CGCCGTCAGC CCAGGAATTG GCCGATCTGC GCTTTGCCTG GACCGTGGCG AAACACACGA AATCCAACGC GATCATCTAC GCCAAGGGCG GTGCAACCGT GGGCATCGGC GCGGGGCAGA TGAGCCGCGT GGACAGCTCC ACCATCGCAG CGTTGAAGGC GGCACGGATG GGCACGGAAT GCGGAATGGC TGACACGCCC GCTAAGGGAT CGGTCGTGGC GTCGGACGCG TTCTTCCCGT TTGCGGACGG CTTGCTGGCG GCGGCAGAGG CAGGTGCCAC GGCGGTGATC CAGCCCGGCG GCTCCATGCG TGACGCAGAT GTGATCGCTG CCGCCGACGA GGCAGGCCTG GCCATGGTCT TCACCGGCAT GCGCCATTTC CGGCACTGA
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Protein sequence | MTDPAPLTRA LLSVSDKTGL IEFATDLSSR GVELLSTGGT AKALREAGLD VRDVSEVTGF PEMMDGRVKT LHPMIHGGLL ALRDNDAHVA AMKEHGIGAI DLLVVNLYPF EATVAAGADY DTCIENIDIG GPAMIRAAAK NHGAVTVLTD SSQYAGLLSE LDANANKGGG TSFQFRQRMA QAAYGRTAAY DAAVSSWMAG AAEIKTPPHR AFAGSLAQEM RYGENPHQKA AFYLDGSSRP GVATAQQHQG KALSYNNIND TDAAFELVSE FAPDDGPAVA IIKHANPSGV ARGNSLAEAY KAAFDCDRTS AFGGIVALNQ TLDAATAEEI VQIFTEVVIA PDADEDAKAI FAAKKNLRLL TTGGLPDPRA PMVAYKQVAG GLLVQDKDTG HVDPELLEVV TKRAPSAQEL ADLRFAWTVA KHTKSNAIIY AKGGATVGIG AGQMSRVDSS TIAALKAARM GTECGMADTP AKGSVVASDA FFPFADGLLA AAEAGATAVI QPGGSMRDAD VIAAADEAGL AMVFTGMRHF RH
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