| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4040 |
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| Symbol | |
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| ID | 3936528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4142035 |
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| End bp | 4143267 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637906425 |
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| Product | Fmu (Sun) |
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| Protein accession | YP_511982 |
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| Protein GI | 89056531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC GCCCCGCCGC CCTTATTCTG CTCAATGCCG TTCTGCGAGA GCGTCAGATT
CTGGGTCAGG TGGATGTGCC TGCAACGGGG GCAGAGGCCG CGCGTGCCAA CCGGTTGGCT
CTGTCGGTGC TGCGCAATCT GGATGCGGTG GATGCGGTCA TCAAACCTTA CACCACCCGC
AAGCCCCAAA TCGGTGTGCA CAACCTGCTG CGCCTGGGCG CGGTGGAGTT GTTGGTGAAC
GGCGAGGACG CCCATGGTGT CGTCAGTGAC ATCGTCGGCA TTGCCAAGAC CCAGCCGCAC
ACGCGCAAGG CTTCGGGCAT GGTGAACGCG ATCCTGCGCA AAATCGCCGT GGAGGGCGCA
GAGGCGTTTG CCAAAGCGCC ACCGCAACGC CTACCACCGT GGATCGACAA GGCGCTGCGC
AAGCGGATCG GCGCCGATGG CATCCGGGCA ATTGAACAGG CGCAGGCGCA GGTGCCACCG
ATGGATCTGA CCCCACGCGA TGACGGGTTC ATGCTGGAGA ATGCGGAGGT CCTGCCGACG
GGATCTTTGC GGCTGAACAA CCATCCGCAA GTCAGCGCCC TGCCTGGATA CAGTGACGGC
GCATTCTGGG TTCAGGACGC TGCCGCCGCC TTGCCCGTGA AGCTTCTGGG CGATGTGCGG
GGCAAGTCTG TGCTGGATCT CTGCGCTGCC CCCGGTGGCA AAACCATGCA ATTGGCCGCG
GCGGGCGCAG AGGTCACGGC GCTGGATATC TCGGGCCCGC GCCTGCGCCG GGTGGAGGAA
AACCTCGCCC GCACAGGTCT GTCCGCCACG CTCGTGACCG AGGATGCGTT TCAGCACAGC
GGCAGCTACG ACGCGATCCT ACTGGACGCG CCCTGTTCCG CCACGGGCAC CATCCGCCGC
CATCCCGATC TCCCGTTCGT GAAGGATGGC CGGGAGGTCG AGCCGCTGAC CAGGCTACAA
ATGCAGCTGA TCGACCATGC GCTGACCCTG CTCAAACCCG GCGGGACGCT CGTCTATTGC
ACCTGCTCGC TGTTGCCGGT GGAAGGCGAG TTTCAAATCA AAGCGGCCCT CAAACGGCAC
GATGGGCTTA GCATCATTCC CGCGGACCCG GTCGCACTGG GTGGGGATGC GGAATGGGCC
AGCGCCGAGG GCGGGCTCCG CCTCTGGCCG TTTTATTGGG CGGAGAGAGG TGGGATGGAC
GGCTTCTATA TGGCCGCCCT CACGCGGTCA TGA
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| Protein sequence | MKARPAALIL LNAVLRERQI LGQVDVPATG AEAARANRLA LSVLRNLDAV DAVIKPYTTR
KPQIGVHNLL RLGAVELLVN GEDAHGVVSD IVGIAKTQPH TRKASGMVNA ILRKIAVEGA
EAFAKAPPQR LPPWIDKALR KRIGADGIRA IEQAQAQVPP MDLTPRDDGF MLENAEVLPT
GSLRLNNHPQ VSALPGYSDG AFWVQDAAAA LPVKLLGDVR GKSVLDLCAA PGGKTMQLAA
AGAEVTALDI SGPRLRRVEE NLARTGLSAT LVTEDAFQHS GSYDAILLDA PCSATGTIRR
HPDLPFVKDG REVEPLTRLQ MQLIDHALTL LKPGGTLVYC TCSLLPVEGE FQIKAALKRH
DGLSIIPADP VALGGDAEWA SAEGGLRLWP FYWAERGGMD GFYMAALTRS
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