Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4032 |
Symbol | |
ID | 3936520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4136696 |
End bp | 4137580 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637906417 |
Product | alpha/beta hydrolase |
Protein accession | YP_511974 |
Protein GI | 89056523 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.118586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATTG ACGGGTTCAT GGCCACAAAG GTGGCGACAA ACGGGATTGA GTTGAGCGTG CATCGGGCGG GCACCGGCAC GCCGCTGATC CTGCTGCATG GGTTTCCGCA GAACCACCGG TGCTGGGAAC GGATTGCGCC ACGTCTGGCT GAACGCTTCG ATGTGATCGT GCCGGATTTG CGCGGGTATG GGGACAGCGA TGCGCCGGAA GGTGTCGATG CCTATGCCAA GCGTGAAATG GCTTTGGATA TTGTCGGGCT GATGGATGCG CTGGATCTGG AGCGGGCGCA TATCCTGGGC CATGATCGGG GCGCGCGGGT GACCTACCGG CTGGTGTTGG ATCACCCGGA TCGCGTGGAT CGGCTTGGTA TTATCGAGAT TGTGCCGACT GGCGATTTCT GGGCGGCCTG GGATGCGGAG CTGGCGCTTG CGGCCTATCA CTGGACCTTC CTCGCGCAGC CCGCGCCGAT GCCGGAGCGG ATGATTCTGG CCGATGGGCC GGGGTACATG GATTGGACCC TGGACGCCTG GAGCAAAGCG CCCGGGCTGT CTTCTTTCAG CGAGGCGGCA TTGGCCAGCT ACCGGGCCCA GGGCGCGGAT CCACAGCGCG TCGCGGCCAT GTGCAACGAT TACCGTGCGG GCGCTACGAT TGACCGGCGC ATCGATGCCG AAAGCCGGGC GGCCGGCGCA AAGATCACCG CGCCGTTGCT GTTTCTCTGG GCCGCAGGTG GTTTCCCGGC GCGCACCGGG GACCCTTTGG GCGTTTGGCG GGATTGGGCC GAGACTGTGG ACGGGCAGGA AATCGACGGC ACGGGCCACT TCATGATGGA AGAGGTGCCC GAGCCGGTCC TTGCGGCAGT TCTGGCGCAT TTCGCACCGG AATAG
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Protein sequence | MAIDGFMATK VATNGIELSV HRAGTGTPLI LLHGFPQNHR CWERIAPRLA ERFDVIVPDL RGYGDSDAPE GVDAYAKREM ALDIVGLMDA LDLERAHILG HDRGARVTYR LVLDHPDRVD RLGIIEIVPT GDFWAAWDAE LALAAYHWTF LAQPAPMPER MILADGPGYM DWTLDAWSKA PGLSSFSEAA LASYRAQGAD PQRVAAMCND YRAGATIDRR IDAESRAAGA KITAPLLFLW AAGGFPARTG DPLGVWRDWA ETVDGQEIDG TGHFMMEEVP EPVLAAVLAH FAPE
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