Gene Jann_4032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_4032 
Symbol 
ID3936520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4136696 
End bp4137580 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID637906417 
Productalpha/beta hydrolase 
Protein accessionYP_511974 
Protein GI89056523 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.118586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTG ACGGGTTCAT GGCCACAAAG GTGGCGACAA ACGGGATTGA GTTGAGCGTG 
CATCGGGCGG GCACCGGCAC GCCGCTGATC CTGCTGCATG GGTTTCCGCA GAACCACCGG
TGCTGGGAAC GGATTGCGCC ACGTCTGGCT GAACGCTTCG ATGTGATCGT GCCGGATTTG
CGCGGGTATG GGGACAGCGA TGCGCCGGAA GGTGTCGATG CCTATGCCAA GCGTGAAATG
GCTTTGGATA TTGTCGGGCT GATGGATGCG CTGGATCTGG AGCGGGCGCA TATCCTGGGC
CATGATCGGG GCGCGCGGGT GACCTACCGG CTGGTGTTGG ATCACCCGGA TCGCGTGGAT
CGGCTTGGTA TTATCGAGAT TGTGCCGACT GGCGATTTCT GGGCGGCCTG GGATGCGGAG
CTGGCGCTTG CGGCCTATCA CTGGACCTTC CTCGCGCAGC CCGCGCCGAT GCCGGAGCGG
ATGATTCTGG CCGATGGGCC GGGGTACATG GATTGGACCC TGGACGCCTG GAGCAAAGCG
CCCGGGCTGT CTTCTTTCAG CGAGGCGGCA TTGGCCAGCT ACCGGGCCCA GGGCGCGGAT
CCACAGCGCG TCGCGGCCAT GTGCAACGAT TACCGTGCGG GCGCTACGAT TGACCGGCGC
ATCGATGCCG AAAGCCGGGC GGCCGGCGCA AAGATCACCG CGCCGTTGCT GTTTCTCTGG
GCCGCAGGTG GTTTCCCGGC GCGCACCGGG GACCCTTTGG GCGTTTGGCG GGATTGGGCC
GAGACTGTGG ACGGGCAGGA AATCGACGGC ACGGGCCACT TCATGATGGA AGAGGTGCCC
GAGCCGGTCC TTGCGGCAGT TCTGGCGCAT TTCGCACCGG AATAG
 
Protein sequence
MAIDGFMATK VATNGIELSV HRAGTGTPLI LLHGFPQNHR CWERIAPRLA ERFDVIVPDL 
RGYGDSDAPE GVDAYAKREM ALDIVGLMDA LDLERAHILG HDRGARVTYR LVLDHPDRVD
RLGIIEIVPT GDFWAAWDAE LALAAYHWTF LAQPAPMPER MILADGPGYM DWTLDAWSKA
PGLSSFSEAA LASYRAQGAD PQRVAAMCND YRAGATIDRR IDAESRAAGA KITAPLLFLW
AAGGFPARTG DPLGVWRDWA ETVDGQEIDG TGHFMMEEVP EPVLAAVLAH FAPE