| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4028 |
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| Symbol | |
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| ID | 3936516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4131134 |
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| End bp | 4133254 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637906413 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_511970 |
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| Protein GI | 89056519 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACA TTGTGAAGAA AGAGATCCAG TGGGGCGAAG AGACGCTGAC ACTGGAAACG
GGCCGTGTGG CCCGCCAGGC CGATGGGTCT GTGATCGCGA CGCTGGGGGA AACCTCCGTC
ATGGCCAACG TCACGTTCGC CAAAAGCCCC AAGCCGGGAA TGGATTTCTT CCCGCTGACG
GTTCACTACC AAGAAAAATA CTACGCCGCC GGTAAAGTGC CGGGTGGCTT CTTCAAGCGT
GAGGCGCGGC CCACCGAGAA GGAAACGCTG ACCGCGCGTC TGATCGACCG TCCGATCCGC
CCGCTGTTCG TCCCCGGTTT CAAGAACGAA ACCCTGGTGA TGTGTACGGT CCTGTCCCAC
GATCTGGTCA ACGACCCCGA CATGGTCGCG ATGATCGCAG CCTCTGCCGC GCTGACCATT
TCCGGCGCGC CGTTCCGGGG CCCGATCGCG GGCTGCCGCG TGGGCTTTGA GGATGGCGAA
TACATCCTGA ACCCCGAGAT CGACGATATG CACGATCTGC GCAACAACCC CGAGCAGCGG
CTCGATTTGG TTGTCGCGGG CACCAAAGAC GCCGTCATGA TGGTGGAATC GGAAGCCTAC
GAGCTGACCG AAGCCGAGAT GTTGGGTGCG GTGAAATTCG CCCATGACAG CATCCAGCCC
GTCATCGACC TGATCATCGA TCTGGCCGAA GACGCCGCGA AAGAGCCGTT TGACTTCCAG
GCCCCCGATT ATTCGGAGCT GTTTGAAGCG GTGAAAGCGG CTGGCGAAGA CAAGATGCGC
GAAGCCTATG CCATCACCGA CAAGCTGGAG CGTCAAGCCG CCGTGTCTGC CGTCAAGGAA
GGCGTGAAGG AAGGCCTGTC CGAGGAGCAG TTGGAAGATC CGAACCTGTC GGCTGCGCTG
AAGAAGCTGG AATCGACGGT TCTGCGGTCC GACGTTGTGA AGAACGGACG CCGCATTGAT
GGCCGTGCAC TGGATGAGGT TCGCGACATC GTGTCGGAAA CAAAAGTCCT GCCGCGGACC
CACGGCTCCG CGCTGTTCAC CCGTGGTGAG ACGCAAGGCC TGGTCGTCAC GACCCTGGGC
ACCGGCGATG ATGAGCAATT CATCGACGCG CTGCACGGCA ACTTCAAATC CAACTTCCTG
CTGCACTACA ACTTCCCCCC CTATTCTGTG GGTGAAGCTG GTCGTGTGGG CCCTCCGGGT
CGTCGCGAAA TCGGCCACGG TAAACTGGCG TGGCGGGCAC TTCAGGCGGT TCTGCCTGCG
GCGACGGACT TCCCCTACAC CGTGCGGGTT GTGTCCGAGA TCACCGAATC CAACGGATCA
AGCTCCATGG CGTCCGTCTG CGGTGGGTCG CTTTCGATGA TGGATGCGGG CGTTCCCCTG
AAAGCACCGG TTGCCGGTGT GGCCATGGGT CTGGTGCTGG AAGACGACGG CTCCTACGGG
ATCCTGACGG ATATTCTGGG GGACGAAGAT CACCTGGGTG ACATGGACTT CAAAGTGGCG
GGAACCGAGG CCGGTATCAC GTCGCTGCAG ATGGACATCA AGGTCGCCGG CATCACGCAG
GAGATCATGG AAAAGGCGTT GGAGCAGGCC AAAGCTGGTC GTCTCCACAT CCTTGCGGAA
ATGGCCAAGG CCGTGACCGA AGCCGGCGAA TTCTCCGAGC ACGCCCCGCG CATCGAGACG
ATGCAGATCC CCACCGACAA GATCCGTGAA GTGATCGGGT CCGGCGGTAA GGTCATCCGC
GAGATCGTGG AAGTCTCCGG TGCCAAGGTC GACATCAACG ACGAGGGGAT CATCAAGATC
GCCTCGCCCA ATGGTGACAG CATCCAGAAG GCCTATGACA TGATCCATTC GATCGTGGCA
GAGCCCGAGG AAGGCAAGAT CTACAAGGGC AAGGTCGTGA AGATCGTCGA TTTCGGCGCC
TTCGTGAACT TCTTCGGCAA GCGCGACGGT CTGGTGCACG TGTCCCAGAT CAAGAACGAG
CGACTGAACC ACCCTTCCGA TGTCCTGTCC GAGGGTCAGG AAGTCTGGGT CAAACTGCTC
GGCTTCGATG ATCGCGGCAA GGTCCGTCTG GCCATGAAGA TGGTCAACCA GGAAACCGGA
GAAGAGGGTG CGGCTGAGTA A
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| Protein sequence | MFNIVKKEIQ WGEETLTLET GRVARQADGS VIATLGETSV MANVTFAKSP KPGMDFFPLT
VHYQEKYYAA GKVPGGFFKR EARPTEKETL TARLIDRPIR PLFVPGFKNE TLVMCTVLSH
DLVNDPDMVA MIAASAALTI SGAPFRGPIA GCRVGFEDGE YILNPEIDDM HDLRNNPEQR
LDLVVAGTKD AVMMVESEAY ELTEAEMLGA VKFAHDSIQP VIDLIIDLAE DAAKEPFDFQ
APDYSELFEA VKAAGEDKMR EAYAITDKLE RQAAVSAVKE GVKEGLSEEQ LEDPNLSAAL
KKLESTVLRS DVVKNGRRID GRALDEVRDI VSETKVLPRT HGSALFTRGE TQGLVVTTLG
TGDDEQFIDA LHGNFKSNFL LHYNFPPYSV GEAGRVGPPG RREIGHGKLA WRALQAVLPA
ATDFPYTVRV VSEITESNGS SSMASVCGGS LSMMDAGVPL KAPVAGVAMG LVLEDDGSYG
ILTDILGDED HLGDMDFKVA GTEAGITSLQ MDIKVAGITQ EIMEKALEQA KAGRLHILAE
MAKAVTEAGE FSEHAPRIET MQIPTDKIRE VIGSGGKVIR EIVEVSGAKV DINDEGIIKI
ASPNGDSIQK AYDMIHSIVA EPEEGKIYKG KVVKIVDFGA FVNFFGKRDG LVHVSQIKNE
RLNHPSDVLS EGQEVWVKLL GFDDRGKVRL AMKMVNQETG EEGAAE
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