| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4022 |
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| Symbol | |
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| ID | 3936510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4125403 |
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| End bp | 4126044 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906407 |
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| Product | anti-sigm factor, ChrR |
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| Protein accession | YP_511964 |
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| Protein GI | 89056513 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAAA TGAACCACTC CGTCCCCGAC GACATGCTGA TGGGCTATGC GTCCGGATCG
CTTGCGAAAG CCTTCGATCT GGTGCTGGCG ACCCATGTGT CGCTGAACGA TGACGCCCGC
GCCCGGCTAG AGACGTTTGA AGCGCTTGGC GGCGCGATCC TCTGCGGCAT GGACACCGTT
GATGTAGACG ACGACAGCCT GGAACAGACG ATGGCCAAGA TCCGTGGCAA TGCGCCAATT
GAACGGCCCG CGCCGTCCGA GGGCCTGTTC CCGACGCCCC TGCAATCCAT GGTCGGTGGC
GATGTGGATG CCGTGCGCTG GCGCAGCGTT GGCGGCGGCG TGAAGCAATG TGTGCTGCAT
TCCGATGACG GCGGCACCGT CCGGCTTCTG TCGATTGCGG CGGGCCGGGC CATGCCCGCC
CACAGCCACC ACGGAACGGA AATGACGCTT GTGCTGCAAG GCGCGTACCG GGACGACGAC
GGCATCTTCG CCCGGGGCGA TCTGGAACTG GCGGACACCG ACACCAACCA CCAGCCAGTG
GCCGAGCCCG GTCAGGATTG TATCTGCCTT GTGGCCACCA ACGCCAAGCT GAAGTTCCAG
GGCCTGTTGC CGCGCATTGC TCAGCCCTTC CTCGGCATCT GA
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| Protein sequence | MTEMNHSVPD DMLMGYASGS LAKAFDLVLA THVSLNDDAR ARLETFEALG GAILCGMDTV
DVDDDSLEQT MAKIRGNAPI ERPAPSEGLF PTPLQSMVGG DVDAVRWRSV GGGVKQCVLH
SDDGGTVRLL SIAAGRAMPA HSHHGTEMTL VLQGAYRDDD GIFARGDLEL ADTDTNHQPV
AEPGQDCICL VATNAKLKFQ GLLPRIAQPF LGI
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