| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4013 |
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| Symbol | |
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| ID | 3936501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4116374 |
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| End bp | 4118284 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637906398 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_511955 |
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| Protein GI | 89056504 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCG ATCCCAAAAC CGATACCTTC ACCCGCGCAG GCCTCAACCT GATCCAGCAG
GCGCTGTCGA TCTACGATGC GGATCTGCGG CTGGCTGTGT CCAATCGCCC GTTCCAGGAG
ATGTTCGACC TGCCCCGGCA CCTCGTCACC CCCGGCGCGC GGTTCGACGA GACCATCGCC
TATCTGGTCG CCCGCGGTGA ATATGGGGAG GTGGAGGATG AGGCGAGTTT CGTGCAGACC
CGTGTCGATC AGGCGCTGGC CTTCGTGCCC CATTATCTGG AACGGGTCCG CGCCAATGGT
CGCGCGATTT CCATCGAAGG CTCCCCCCTG CCCGAGGGCG GCTGGGTCAC CGTCTACACC
GACATCACTG CCGTCAAACG GCAGGAGGCG CTTTTGCGCG CCCGGTCCGA GGAGCTGTCG
GATCAGGTTC TGAGCCACAC CGAAGAACTG GCCCTGACCA ACCGCCGTCT GGAAGCCACG
ATCAGCCAGT TGCAGGAGGC CAAAGCCACC GTCGGAGAGA TGGAGGCCCG CACCCGTCTG
GTGACCGAGA TGACGCCCGC CCATATCGCC CATATCGACG CGCGCGGCAT CTATACCTTC
ACCAACCGCC GCCTGTCCTC GCTGCTTCAG GGGCGCGCGA ATGATATCAT CGGCCTCAGC
TTTGAGGAGG CGTTGGGCGA AGACACCGCC GCCCTCCTCC GCCCCACCCT TGCGCGCGCC
AGTGCGGGGG AGCCTGCGGT GCTGGAATTC TCGGAACCCG CATCGGGCCG CCGCATCCGC
ACGGCCTTCA CGCCAGATGA GCATTCAGAC GGCGGCGTCT ATCTTCTGTC CACCGATGTC
ACCCAGGAAA CCCAGGCCCG CACCGCGCTG GAGCAAACCC ATAAACGAGA ACTCGCGGCG
CAGCTGACCA GCGGCCTCGC CCATGACTTC GCCAACCTGC TGACGATTAT TCTGGGCCTG
CAGGCGCGGC TGGAAAAACT GCCCCTGCCC CATGGCGCCC ATGAATTGAC GGGGGCGACC
CGGATGGCGG TGCGGCGCGG GGGGCTTCTG CTGGACAAGA TCGCCAACAT GACCAGCACC
CGGGAGATCC GCGCAGCCCC CGTCGTGGTG CAGGATTTCC TTGCCGGGTT CACGCCTCTG
GCCCAGGCCA CGCTGCCCGA TGCCGTCGCC CTGTCGGTGC GGTGCAACGT GGCCCACACT
GCCCTGATGC TGGATGCCGG GTCCCTGCAA GATGGGCTGT TGAACCTTGT CCTGAACGCC
CGCGACGGGA TCGGTGCGGA GGAGGGGCAA ATCACGCTGA TCCTGCAGGA CGTCAAGGAC
ACCTGGCTGG AAATCACGGT GGAGGACACC GGGCGCGGCT TTTCCGACGC CGCCTTGGAT
CAGGCGCTGA ACCCGTTTTT CACCACCAAA GGGGATGAGG GGTCGGGCCT GGGCCTCACC
ATGGTCTATG ATCTTGTGAA GCTCGCGGGC GGCACCCTGC GCCTGTCCAA TTCAGCAAGT
GGCGCGCGCG TCATGCTGCG GCTGCCCCTG CGTCCCGCTC AGGCCGATGC GCGCCCCCGT
CTGATCCTTC TGGTTGACGA TATGTCCGAG ATCCGCGCGC AGGTCCGTGA CCTGCTGACC
GACCTGGGCC ATCAGGTGAT CGAGGCCGCA ACGGCGGAGG AGGCGCAAAC GCTGGCCGAT
CTGCCGGGCC TCGACTGGGT CCTGTCGGAT ATCCATCTGG GTGAAGTCGA CGGCGTTGCC
GTCCTGGGCC ACATCGCGGA CCGCCACCCC GCCCTGCGCC TGTCGCTGAT GACATCCCTG
CCGCCCGATG ATCCGCTGTT CATGGCGGGG GCGGCCCGCT GGCCGGTCCT GCGCAAACCC
ATCGACGTCA GCGCCCTCGC GGCCTTGTTG ATGACGGAGG TCACCCCATG A
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| Protein sequence | MARDPKTDTF TRAGLNLIQQ ALSIYDADLR LAVSNRPFQE MFDLPRHLVT PGARFDETIA
YLVARGEYGE VEDEASFVQT RVDQALAFVP HYLERVRANG RAISIEGSPL PEGGWVTVYT
DITAVKRQEA LLRARSEELS DQVLSHTEEL ALTNRRLEAT ISQLQEAKAT VGEMEARTRL
VTEMTPAHIA HIDARGIYTF TNRRLSSLLQ GRANDIIGLS FEEALGEDTA ALLRPTLARA
SAGEPAVLEF SEPASGRRIR TAFTPDEHSD GGVYLLSTDV TQETQARTAL EQTHKRELAA
QLTSGLAHDF ANLLTIILGL QARLEKLPLP HGAHELTGAT RMAVRRGGLL LDKIANMTST
REIRAAPVVV QDFLAGFTPL AQATLPDAVA LSVRCNVAHT ALMLDAGSLQ DGLLNLVLNA
RDGIGAEEGQ ITLILQDVKD TWLEITVEDT GRGFSDAALD QALNPFFTTK GDEGSGLGLT
MVYDLVKLAG GTLRLSNSAS GARVMLRLPL RPAQADARPR LILLVDDMSE IRAQVRDLLT
DLGHQVIEAA TAEEAQTLAD LPGLDWVLSD IHLGEVDGVA VLGHIADRHP ALRLSLMTSL
PPDDPLFMAG AARWPVLRKP IDVSALAALL MTEVTP
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