| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4006 |
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| Symbol | |
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| ID | 3936494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4110202 |
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| End bp | 4111188 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637906391 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_511948 |
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| Protein GI | 89056497 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAC AACTGATCTT TGCGATGGAA GTCACGCTCA ACGGATTGTT GAACGGGGTG
ATGTACGCGC TTGTGGCGCT GGGCTTTGTG CTGATCTTCA AAGCGAGCGG TATCTTCAAT
TATGCGCAGG GGGTTATGGC GCTGTTTGCG GCGATGACGC TGGTGGGCAT CCAGCAGGGG
CGGGTGCCCT TCGGTCACCT GATCAACGAG ATTTTCGGGA CCGACATCCA CTATTTCGGG
TGGGAGGTTC CGGCGCTTGG CGCGATCCTT CTGACCGTCC TGATCATGAT CGCCTTCGCC
TATCTGGTGC AGCGGTTCGT GTTCAAACAT CTGGTGGGGC AGGAGCCGAT CATCCTGTTC
ATGGCCACGA TTGGTCTGGC CTATTTCCTG GAGGGGGTGA GCGACTTGAT GTGGGGGTCC
GAGATCCGCA ATCTGGATGT GGGCCTGCCC CAGGGGATCA ACGACTGGAT CGACGTGACC
ACGTTCGAGA TCTTCGGTTA CGGGTTCTTC ATCGACAATC TGGACATGGC CGCGGCGGTG
ATTGCCGCGA TCCTGGTGAT GGGGCTGATC GCCTATTCGC AATACACCAA GAACGGGCGT
GCGATGCGGG CGGTGGCCGA TGATCATCAG GCGGCGCTGA GCGTGGGGAT ATCCCTGAAT
TACGTCTGGG TGCTGGTCTG GTCGCTGGCG GGGATCGTGG CGCTGGTGGC GGGGATCATG
TGGGGCAGCA AGTCCGGCGT GCAGTTTTCG CTGTCGTTGA TCGCCTTGAA GGCCTTGCCG
GTGCTGATGC TGGGGGGCTT CACGTCGATC CCCGGTGCCA TCGTGGGTGG CTTGATCATT
GGCGTGGGTG AGGCGTTGTT CGAGTTCGCA ATCGGCCCGA TGATCGGCGG CGCGACGGAG
AACTGGTTCG CCTATGTGCT GGCCTTGCTG TTCCTGGTGT TCCGCCCGCA GGGTTTGTTC
GGGGAGAAGA TCATTGAGCG GGTTTGA
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| Protein sequence | MPEQLIFAME VTLNGLLNGV MYALVALGFV LIFKASGIFN YAQGVMALFA AMTLVGIQQG
RVPFGHLINE IFGTDIHYFG WEVPALGAIL LTVLIMIAFA YLVQRFVFKH LVGQEPIILF
MATIGLAYFL EGVSDLMWGS EIRNLDVGLP QGINDWIDVT TFEIFGYGFF IDNLDMAAAV
IAAILVMGLI AYSQYTKNGR AMRAVADDHQ AALSVGISLN YVWVLVWSLA GIVALVAGIM
WGSKSGVQFS LSLIALKALP VLMLGGFTSI PGAIVGGLII GVGEALFEFA IGPMIGGATE
NWFAYVLALL FLVFRPQGLF GEKIIERV
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