Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4001 |
Symbol | |
ID | 3936489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4105016 |
End bp | 4106218 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637906386 |
Product | phenylacetate-CoA ligase, putative |
Protein accession | YP_511943 |
Protein GI | 89056492 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGGACA AAAGCCAAGG CCATTTTGAT GCGCTGGAGA CCCGCAGCGC CGATCAGCGC GCGGCAGAGC AATTGGCCGC ACTGAATGTG CAACTGACCC GTGTTGCCGA GGCGCAGGAG AGCTGTCTTG CGTCCGGTCC CCTGTCCGAT CTGGGCGATC TGGCGGGCCT TCCGGTGCTG CGCAAATCGG ATCTTGTGGC GTGGCAGGCG GAACAGCCGC CGTTCGGGGG AATGGCCGTG TCGAACGTGG CCCATGTGTT CCAATCCCCC GGCCCGATCT ATGAGCCCGG CGGCGTCAGC CACGATTGGT GGCGCATGGG GCGGTTCCTG CATGCGGTGG GCATCGGGGC GGGTGATATT GTGCAGAACT GCTTTGGTTA TCACCTGACG CCCGCTGGCA TGATCTTCGA GAGCGGCGCG CGGGCCGTGG GGGCGGCGGT TTTGCCCGCA GGTGTCGGGC AGACGGAGCT ACAGGTGCGG GCCGCGAAAG ACGTTGGCTG CACGGCCTAT GCGGGCACGC CGGATTATCT GAAGGTGATC CTCGACAAGG CCGATGAGAT GGGGGAGGCG CTGCGCTTCA CCCGCGCGGC GGTGGGCGGT GGCGCGCTGT TCCCGTCCCT GCGCGCGGAA TATGCCGACC GCGGGATTGC CTGCCTGCAA TGCTACGCCA CGGCGGATCT GGGCAACATC GCCTATGAAA GCCACGCGAT GGAGGGGATG ATCCTGGATG AGGGCGTGAT TGTTGAGATC GTGCGCCCCG GGACCGGCGA TCCGGTGGCC GAGGGGGAGG TGGGCGAAGT TGTCGTCACC TCGCTCAACC CCGATTACCC GCTGATCCGG TTCGCCACCG GCGACCTCAG CGCGATCATG GCGGGTCAAA GCCCCTGCGG GCGGACGAAT GCGCGGATCA AGGGCTGGAT GGGTCGCGCC GATCAGACGA CCAAGATCAA GGGTATGTTC GTGCGGCCTG AGCAGGTGGC CGATCTGGTC GCCAAAACCG GCGTGACCAA GGCGCGGGTC ACGGCGTCCC GCGACGGGGA ACAGGATGTG ATGCACGTTC AGGTCGAAGG TGACGCAGAT GAAACCGCGC TGGCCGACGC GGTGAAGGCA ACGCTGAAGC TGAGCGGGAC GGTCGAGGTC GTGGCCCCGG GAACCCTGCC CAACGACGGC AAGGTGATCG ACGACCAGCG CAGCTACGAC TAG
|
Protein sequence | MLDKSQGHFD ALETRSADQR AAEQLAALNV QLTRVAEAQE SCLASGPLSD LGDLAGLPVL RKSDLVAWQA EQPPFGGMAV SNVAHVFQSP GPIYEPGGVS HDWWRMGRFL HAVGIGAGDI VQNCFGYHLT PAGMIFESGA RAVGAAVLPA GVGQTELQVR AAKDVGCTAY AGTPDYLKVI LDKADEMGEA LRFTRAAVGG GALFPSLRAE YADRGIACLQ CYATADLGNI AYESHAMEGM ILDEGVIVEI VRPGTGDPVA EGEVGEVVVT SLNPDYPLIR FATGDLSAIM AGQSPCGRTN ARIKGWMGRA DQTTKIKGMF VRPEQVADLV AKTGVTKARV TASRDGEQDV MHVQVEGDAD ETALADAVKA TLKLSGTVEV VAPGTLPNDG KVIDDQRSYD
|
| |