Gene Jann_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3996 
Symbol 
ID3936483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4100485 
End bp4101342 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content65% 
IMG OID637906380 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_511938 
Protein GI89056487 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCG CGTTTCGCCT TGAGCTGCCC CCGGAAACGA CCAGCTCCGT TGTGGTCGCC 
TCGCCCCATT CGGGCCGCCA TTACGCGCCC GCCTTTCTGG CGCAGACGGT GTTGGATGAA
CGGGTTGTCC GATCGTCGGA AGATGCATTC ATGGACCGTT TGATCGCTGC CGCGCCGTCT
TTGGGGGCGC CGCTGTTGGC CGCGGAATGG CCGCGCGCCT ATCTGGATTT GAACCGGGGC
GCGGATGAGT TGGACCCGGC GTTGATCGAC GGCGTGGTGC GCGGTGCGCA AACGCCCCGG
ATCAATTCCG GCCTTGGGGT CGTGCCGCGT GTCGTGGCCA ACGGGCGTGC GATTTACCGT
GGAAAACTGA CCCGCGCCGA AGCTGAGGCG CGAATCGCGC AGATCTGGCG GCCCTACCAC
GCAGAACTGG CGCGGCTGAT GGATGCGGCG AAGGCGGAGT TTGGTCAGGC GGTGCTGCTG
GATTTCCATT CCATGCCCCA TGAGGCGCTG GATGCCGTCG CCCGTCCGGG GCTGCCACGC
CCGCAAATCG TGCTGGGGGA CCGTTTTGGT GCCTCCGCCT CCAGTGAGAT CGTCGATGTG
CTGGAGCAGG GCTTTCTGGA TGCGGGCCTG ATCGTCAGCC GCAATGCGCC TTTTGCGGGG
GCCTATATCA CGCACCGCTA TGGCCGCCCG TCCAGGGGAC ACCATGCCAT CCAGGTTGAG
ATTGACCGGA AGCTCTACAT GGATGAGCGG ATGATCCGGC CCAACGCTGA GTTCGAGACG
CTGAAGCAGA TCATCGCACA GGTCCTGTCG CGGGTGATCG GCGCGTTGCC GGGCCGGGTG
CCTTTGGCGG CTGAGTAA
 
Protein sequence
MHPAFRLELP PETTSSVVVA SPHSGRHYAP AFLAQTVLDE RVVRSSEDAF MDRLIAAAPS 
LGAPLLAAEW PRAYLDLNRG ADELDPALID GVVRGAQTPR INSGLGVVPR VVANGRAIYR
GKLTRAEAEA RIAQIWRPYH AELARLMDAA KAEFGQAVLL DFHSMPHEAL DAVARPGLPR
PQIVLGDRFG ASASSEIVDV LEQGFLDAGL IVSRNAPFAG AYITHRYGRP SRGHHAIQVE
IDRKLYMDER MIRPNAEFET LKQIIAQVLS RVIGALPGRV PLAAE