| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3992 |
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| Symbol | |
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| ID | 3936479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4097237 |
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| End bp | 4098127 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906376 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_511934 |
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| Protein GI | 89056483 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAG ACATTCTTGG CGGCCTTGGG GGCGGCGGTG TGCTGACCCT GGCGCTGGCC
CTTTTCATCA TTCTTTGCAT CTACCTTGGT ATTCGGATCG TACCGCAATC CGAAAAATAC
GTGGTGGAAC GCTTTGGCCG CCTCAAGTCG GTCCTTGGGC CGGGCATCAA CATCATCGTG
CCGTTTCTGG ACCGTGTGGC GCACAAGGTC TCGGTGCTGG AGCGTCAGTT GCCCAATGCG
GAGCAGGACG CGATCACCAA GGACAACGTG CTGGTGAAGA TCGACACCTC CGTCTTCTAC
CGCATCCTTG AGCCGGAAAA GACCGTCTAC CGGATCCGTG ACGTGGACGG CGCGATTGCC
ACCACCGTCG CCGGGATCGT CCGGGCTGAA ATGGGTAAGA TGGACCTGGA TGAAGTGCAA
TCGAACCGGT CTGCCCTGAT CACCTCCATC AAGCAGCAGG TGGAAACGGC CGTGGATGAT
TGGGGGATCG AGGTGACGCG CGCGGAAATC CTTGACGTGA ACCTTGATCA GGCCACCCGC
GATGCGATGT TGCAGCAGCT GAACGCAGAG CGGGAACGCC GCGCGGCTGT CACACGCGCC
GAGGGTCAGC GCCGCGCGGT GGAACTCTCC GCCGATGCCG AGCTTTACGA GGCCAAGCAA
GTCGCCGAAG CGCGGCGGAT CACGGCGGAT GCCGAGGCCT ATGCCACGGG CGTGGTTGCG
GAAGCCATCG CGAAGGGCGG GCTTGAGGCC GTGCAATACA ACATCGCGCT GGAGCAGGTG
AAAGCCATTG GCAGCCTGGC GTCCGGTCAG GGCAACAGCA CCATCGTGGT GCCAGCGGAC
GCCGTTGATG CCTTTGGCAA GGCGTTCCAG ATGTTGAAAG GGCGCAGCTG A
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| Protein sequence | MLEDILGGLG GGGVLTLALA LFIILCIYLG IRIVPQSEKY VVERFGRLKS VLGPGINIIV
PFLDRVAHKV SVLERQLPNA EQDAITKDNV LVKIDTSVFY RILEPEKTVY RIRDVDGAIA
TTVAGIVRAE MGKMDLDEVQ SNRSALITSI KQQVETAVDD WGIEVTRAEI LDVNLDQATR
DAMLQQLNAE RERRAAVTRA EGQRRAVELS ADAELYEAKQ VAEARRITAD AEAYATGVVA
EAIAKGGLEA VQYNIALEQV KAIGSLASGQ GNSTIVVPAD AVDAFGKAFQ MLKGRS
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