| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3989 |
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| Symbol | |
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| ID | 3936476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4095453 |
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| End bp | 4096142 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637906373 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_511931 |
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| Protein GI | 89056480 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACG ACCGTTTGAT CGTGGCGCTG GATGTGCCCA ACGTGGTGCA GGGCCTGGCG
CTGGCCGAAA AACTCGGCGA CGCCGTTTCA TTCTACAAAA TCGGACTGGG GATGCTGACC
GGCGGTGGCC TGGCGCTCGC CAATGAGCTG AAGCAGGACC ACGGCAAGCG CATTTTCCTT
GATATGAAGT TGTTCGATAT TTCCGCCACG GTCGAGGCCG CGGTGCGGGG GCTGGCGCAA
TTCAACCTGG ATTTCCTGAC CGTCCATGGC GATCCCCACG TGGTGCGCGC CGCCAAGGAA
GGAGCGGCGG GCAGCGACAC GAAGATCCTT GCGGTGACGA TCCTGACCTC TCTGGATCGG
ACCGATCTGG ACGATTGCCT GATCCGGGAT GGAGAGATGC TTGATCTGGT GGCCGAGCGG
GCGGGCCGCG CGTTTGAGGC GGGCGCCGAT GGCGTCATCT CTTCCCCGCA CGAAGCGACC
ATGATCCGCG CCCTGCCCGA GGCCAAGGGC CGCCTGATCG TGACCCCCGG CGTCCGCCCA
ACGGGCAGCG CGTCCGGCGA CCAGAAACGC ATCGCGACGC CGCGCCAGGC CATCGCGGAC
GGGGCCGACC ACATCGTCGT GGGCCGCCCG ATCTGGCAGC ATCAGGACCC GCGTGCGGCG
GCGCAGATGG TGGTGGCGGA CCTGCCTTAA
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| Protein sequence | MSDDRLIVAL DVPNVVQGLA LAEKLGDAVS FYKIGLGMLT GGGLALANEL KQDHGKRIFL
DMKLFDISAT VEAAVRGLAQ FNLDFLTVHG DPHVVRAAKE GAAGSDTKIL AVTILTSLDR
TDLDDCLIRD GEMLDLVAER AGRAFEAGAD GVISSPHEAT MIRALPEAKG RLIVTPGVRP
TGSASGDQKR IATPRQAIAD GADHIVVGRP IWQHQDPRAA AQMVVADLP
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