| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3987 |
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| Symbol | |
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| ID | 3936474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4091644 |
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| End bp | 4094259 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906371 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_511929 |
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| Protein GI | 89056478 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0598394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.931428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAG AAAAGTTCAC CGACCGCGCA CGCGGCTTCC TTCAGGCCGC ACAAACCATC
GCGCAGCGCG AGGATCACCA GAAACTGGTG CCCGAGCATC TTTTGAAGGC CCTGCTAGAC
GATGACGAAG GTCTGGCCAG CACCCTGATC GGACGCTCTG GCGGCACGCC CGCGCGGGTC
CGTGAGTCGC TGGACGCGAC CATGGCCAAG CTGCCCGTCG TCACCGGCGA CGGCGCGCAG
GTCTATATGG ACAAGCAATT GGGCAAGGTC CTGGATGAGG CCGAGAAGCT CGCCACCAAG
GCCGGCGACA GTTTCGTGCC CGTCGAACGG CTGCTGACCG CGCTCGCCAT GGTCAAATCC
GGCGCGAAGG ATGCGCTGGA CAAGGGCGGC GTGAACGCGC AGGCCCTCAA CGCTGCGATC
AATGATCTGC GCAAGGGCAA GACCGCCGAT TCAGCCTCTG CCGAAGACAA TTACGACGCG
CTCAACAAAT ACGCCCGTGA CCTGACGGAG GCTGCGCGGG AGGGCAAGAT TGACCCGATC
ATTGGCCGCG ACGAAGAAAT CCGCCGCGCC ATGCAGGTGC TGTCACGCCG GACCAAGAAC
AACCCTGTCC TGATCGGGGA ACCCGGCGTC GGCAAAACTG CCATCGCCGA AGGCCTCGCC
CTGCGGATCA TCAACGGCGA CGTCCCCGAA AGCCTGCGCA ACAAGACGCT GATGTCGCTC
GACATGGGCG CGCTGATCGC GGGCGCGAAG TACCGTGGCG AGTTTGAAGA ACGCCTGAAA
GCCGTCCTGA CCGAAATCGC CGATGCGGCC GGTGAAATCA TCCTGTTCAT TGACGAGATG
CACACCCTTG TGGGCGCGGG CAAAGCGGAC GGGGCGATGG ATGCCGCCAA CCTGATCAAG
CCCGCCCTGG CGCGCGGCGA ATTGCATTGC GTCGGCGCCA CGACGCTGGA TGAATACCGC
AAATATGTGG AAAAGGACGC CGCTTTGGCG CGCCGGTTCC AGCCTTTGGT GGTGGAAGAA
CCGACGGTGG ATGACACCGT CTCCATCCTG CGCGGGATCA AGGAAAAGTA CGAGTTGCAC
CACGGTGTTC GCATCAGTGA CAGCGCGTTG GTTGCCGCTT CAAACCTGTC GCATCGGTAT
ATCACGGACC GGTTTCTGCC CGACAAGGCC ATCGACCTGA TGGACGAAGC GGCGTCCCGT
CTGCGGATGG AAGTGGACAG CAAGCCCGAA GAATTGGACG CGCTGGACCG TCAGATCCTG
CAAATGCAGA TCGAGGCGGA GGCGTTGAAG CAGGAATCCG ATACGGCGTC GAAGGACCGG
CTTGAGACGC TTGAAAAAGA CCTCGGCGAT TTGCAACAGC AATCCGCGGA AATGACCGCC
AAGTGGCAGG CGGAGCGGGA CAAGTTGGAA TCCGCGCGCG GGTTGAAGGA ACGCCTTGAC
CATGCCCGCG CGGAGTTGGA TCAGGCCAAG CGCAACGGTG ATCTCGGCAA AGCGGGGGAG
CTGTCCTATG GCGTGATCCC GCAGCTGGAA AAGGAGCTGG AGGTCGCAGA GGCGCAGCCC
GATGACGTCA TGGTGGAAGA GGCCGTTCTG CCCGAACAGA TCGCCGAAGT GGTGGAGCGG
TGGACCGGCG TGCCGGTCGC CAAGATGCTG GAAGGCGAAC GCGAAAAGCT CCTGCGCATG
GAAGACGAAC TTGGCAAGCG CGTCATCGGC CAGCATCAAG CGGTCTCCGC CGTGTCCCGG
GCCGTCCGTC GTGCCCGCGC GGGCTTGCAG GATGAGGGGC GTCCCTTGGG CAGCTTCCTG
TTCCTCGGGC CCACGGGTGT CGGCAAGACC GAGTTGACCA AGGCGCTTGC CGAATACCTC
TTTGATGATG ATCAGGCCAT GGTCCGCATC GACATGTCGG AATTCATGGA AAAACACGCG
GTGGCCCGTC TGATCGGCGC GCCTCCGGGC TATGTCGGCT ATGACGAGGG CGGCGTGCTG
ACCGAAGCGG TGCGGCGTAG GCCCTATCAG GTGATCCTGT TTGATGAGGT CGAAAAGGCG
CATCCGGAGG TCTTCAACGT GCTTCTTCAG GTGCTGGATG ATGGCATTCT GACCGATGGT
CAGGGCCGTC AGGTGGACTT CAAGCAGACC TTGATCGTGC TGACGTCAAA TCTTGGCAGC
CAGGCGCTGA GCCATCTGCC CGAGGGCAGT GACGCGGCGC AGGCGCAGCG CGATGTGATG
GACGCCGTGC GCGCCCATTT CCGGCCGGAA TTCCTGAACC GTCTGGATGA TATGATCGTC
TTCGACCGCC TGACGCGGGC GGATATGGAT GGTATCGTCA AGATCCAGCT GGGGCGCCTG
GAACGTCGTC TGGCCGAGCG GAAAATCCAG CTGACCTTGG ACGAGGCCGC GCAGACCTGG
CTTGCGGATG AAGGGTATGA CCCGGTCTTC GGGGCCCGTC CGCTGAAGCG GGTGATCCAG
CGCGCGTTGC AGGACCAGCT GGCCGAAATG ATCCTGGCGG GCGATGTGAC CGACGGCGCG
GATATCACGG TCAGCGCCGG GGCCGATGGG CTGATCGTGG GCGACCGCGT GGCCCCGTCC
AACCGACCCA AGCCCGACGA TGCCGTGGTC CATTAG
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| Protein sequence | MNLEKFTDRA RGFLQAAQTI AQREDHQKLV PEHLLKALLD DDEGLASTLI GRSGGTPARV
RESLDATMAK LPVVTGDGAQ VYMDKQLGKV LDEAEKLATK AGDSFVPVER LLTALAMVKS
GAKDALDKGG VNAQALNAAI NDLRKGKTAD SASAEDNYDA LNKYARDLTE AAREGKIDPI
IGRDEEIRRA MQVLSRRTKN NPVLIGEPGV GKTAIAEGLA LRIINGDVPE SLRNKTLMSL
DMGALIAGAK YRGEFEERLK AVLTEIADAA GEIILFIDEM HTLVGAGKAD GAMDAANLIK
PALARGELHC VGATTLDEYR KYVEKDAALA RRFQPLVVEE PTVDDTVSIL RGIKEKYELH
HGVRISDSAL VAASNLSHRY ITDRFLPDKA IDLMDEAASR LRMEVDSKPE ELDALDRQIL
QMQIEAEALK QESDTASKDR LETLEKDLGD LQQQSAEMTA KWQAERDKLE SARGLKERLD
HARAELDQAK RNGDLGKAGE LSYGVIPQLE KELEVAEAQP DDVMVEEAVL PEQIAEVVER
WTGVPVAKML EGEREKLLRM EDELGKRVIG QHQAVSAVSR AVRRARAGLQ DEGRPLGSFL
FLGPTGVGKT ELTKALAEYL FDDDQAMVRI DMSEFMEKHA VARLIGAPPG YVGYDEGGVL
TEAVRRRPYQ VILFDEVEKA HPEVFNVLLQ VLDDGILTDG QGRQVDFKQT LIVLTSNLGS
QALSHLPEGS DAAQAQRDVM DAVRAHFRPE FLNRLDDMIV FDRLTRADMD GIVKIQLGRL
ERRLAERKIQ LTLDEAAQTW LADEGYDPVF GARPLKRVIQ RALQDQLAEM ILAGDVTDGA
DITVSAGADG LIVGDRVAPS NRPKPDDAVV H
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