Gene Jann_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3986 
Symbol 
ID3936473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4091091 
End bp4091567 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID637906370 
Producthypothetical protein 
Protein accessionYP_511928 
Protein GI89056477 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.1504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.568461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGGGG CGGGCGGAGG ATGTTCCCTT CTCGCCATGC AGGTCGAGAG CATTGATCAT 
GTCCATATCG AGGTGCGGGA CCGCGCGCGG GCGGCGGATT GGTGCGCCCG TGTCCTTGGC
CTGCGACCCC ATGGGGACCT TGCATCCTGG GCCGCGGATC CGATGGGGCC GCTGATCCTG
AAGGCTGGCG ATGGGCGCCC CGCATTGTCG CTGTTTGCCC GTGCCTGTGC GCCGCCAACG
CGCGACACAA CCATTGCCTT CCGCATGACG GGGACGGCGT TCCTCGCCTT CCGGGACGCT
CTGCCGGAGC TTGGCCTGAG CGATGCCAAG GGCGGCCCGG TGACGGCTGC GGACGTGGTG
GATCATGCGC TGTCGTGGTC GATCTACTTT TGCGACCCGG ACGGGAACCG GTTCGAGGTC
ACGACCTACG ATTACGCCGA TGTCGCGGCG GCGCTGTCGC CCGAGCCCCG CCCATAA
 
Protein sequence
MRGAGGGCSL LAMQVESIDH VHIEVRDRAR AADWCARVLG LRPHGDLASW AADPMGPLIL 
KAGDGRPALS LFARACAPPT RDTTIAFRMT GTAFLAFRDA LPELGLSDAK GGPVTAADVV
DHALSWSIYF CDPDGNRFEV TTYDYADVAA ALSPEPRP