| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3979 |
|---|
| Symbol | |
|---|
| ID | 3936466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 4085413 |
|---|
| End bp | 4086015 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637906363 |
|---|
| Product | putative sulfite oxidase subunit YedZ |
|---|
| Protein accession | YP_511921 |
|---|
| Protein GI | 89056470 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2717] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA CCATCAACAG CGCCGTCCGC ATGATCCCCG GTTGGGTGTT GTATATAGTA
GGGGCCGCTT ACGGCGGCTG GCTGTTCTAT CTGGGCCTGA CGGGTGGTCT GGGCGTTGAG
CCGATCGAGG CGTTGGAACA CGCTTACGGC GACGTTGCGC TGAAGCTGAT CATTGCGGGT
CTGGCGATGA CACCGCTGCG CCAACGTCTT GGCCTGAACT TCCAGTGCTG GCGTCGTGCG
CTGGGGGTCC TGGCGTTCTT CTTCGTCCTC GCGCATCTCC TTGTCTGGGC GGTGCTGGAT
GTTCAGCGCC TGTCGGCGAT CTGGGCCGAC ATCATAGAGC GGCCGTATGT GACCATCGGC
ATGGCCGGCT TCCTGGCGCT TTTTCCACTG GCTGTTACCT CGAATAATTA TGCGGTGCGC
AAGTTGGGCG CCGTGAAGTG GCGCAAGCTG CACAAGCTGG CCTATCCCGC TGCTGTGTTG
GGGGCGGTCC ACTATGTCTG GCTCGCCAAG GGCTTTCAAA TCGAACCCCT TGTCTATCTG
ACGATCACCC TGGCGCTTCT GGCGCTTCGA TTTGCGCCGC ACCGTAAGCG CGTGACGGCC
TAA
|
|---|
| Protein sequence | MTQTINSAVR MIPGWVLYIV GAAYGGWLFY LGLTGGLGVE PIEALEHAYG DVALKLIIAG
LAMTPLRQRL GLNFQCWRRA LGVLAFFFVL AHLLVWAVLD VQRLSAIWAD IIERPYVTIG
MAGFLALFPL AVTSNNYAVR KLGAVKWRKL HKLAYPAAVL GAVHYVWLAK GFQIEPLVYL
TITLALLALR FAPHRKRVTA
|
|---|
| |