| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3977 |
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| Symbol | |
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| ID | 3936458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4076868 |
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| End bp | 4078145 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906355 |
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| Product | amidase |
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| Protein accession | YP_511919 |
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| Protein GI | 89056468 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGACA AGGTGACGGC GGCCAAAACT GCTTTGCGCG CCATGGCCGG CCTGAACCCG
CTGGTGCGCG ATCCGTTCGA CCTGTCGACC GGAGGCGATG GCCCGTTGTC AGGTATGCCA
ATCGTGGTCA AAGCCAATAT CGCCATAGAC GAATTGCCCC AGTGTGGCGC GTCCCCGGCC
CTGGAGGACA ACATCGCGCA GAACTCCGCG CCCGTTGTTC AAAGGCTGCT TGACGCCGGG
GCGGTCATTG TCGGGCAGGC AAACATGCAC GAATTGGCGT TCGGCATCAC CAGTTACAAC
GCGTATCACG GCGCGGTCGG CAATCCCGCC AATCCCGCGC ATATGGCCGG TGGCTCCTCT
GGCGGGACGG CCGCTGCGGT TGCGTCCGGG GCGGTTTCCT TGGGCCTGGC CTCGGACACC
GGTGGATCCG GCAGATTGCC TGCCGCCATG TGTGGCTGTG TCGGGTTCCG GCCCACGCAG
GGGCGCTATC CATCGGACGG CATTCTCACG TTGTCGTCCA GCTTTGACAC CGTCACGCCT
ATGGCACGTG ATGTGGCGGG ACTTACCCTG ATCGACGCGG TGATGGCAGG CGTGGCACCC
CGAAAGCGCG ATCCGCACAA ACCGCTGCGC CTCGGTGTGG TGGAAGATGC CTTCTGGCAG
GGCGTCGATG CGGCGATGGC GCAGGCATGT CGTGACAAGC TCAACACCCT TGAGGACGCG
GGCGTGCATC TCGTGCCGCT CAGCGCTCCG GATCTGATGG CCCGCTGCGC GGACATCTCG
ATGGGCATCG TTCTTTATGA AACGCAGATC TACTGGGACG CTTTTCTTGC ATCGCGGGAC
ACCACAATGA TCGCATTCGC AGATCAGATC GCCAGTCCGG ATGTCGCCAG CATTTTTGGT
CACGTCGCCA GTGGTGCGGC CCCGTCCGAT GCCGACTACG CGCAAATGAG CGGCCCCAAG
CGCCGAGCAA TTTGCAAGAT CGTGACTGAT CTGCTGGCTG ACGTCGACGG CCTGATCATG
CCGACACTGG CCACCACCGC CCCGCTGATC GACCAGACCG AGACCTGCCG GATCAATGGC
GAAGAGGTTG ACCTATTCAA CGCTCTGACG GCGCGGGCCC TTGTTGCGTC CATCACTGGC
CATCCCGAGA TCTCCCTGCC TGCGGGGCAG CTGGGCGGGT TGCCCATCGG GTTGGGCATA
TTAGGGACGC ATGGCCAGGA TGATGAATTG CTGGCGGTTG CGGCACAGAT CGAACCCCTG
TTGGCAGCAA CGAATTGA
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| Protein sequence | MNDKVTAAKT ALRAMAGLNP LVRDPFDLST GGDGPLSGMP IVVKANIAID ELPQCGASPA
LEDNIAQNSA PVVQRLLDAG AVIVGQANMH ELAFGITSYN AYHGAVGNPA NPAHMAGGSS
GGTAAAVASG AVSLGLASDT GGSGRLPAAM CGCVGFRPTQ GRYPSDGILT LSSSFDTVTP
MARDVAGLTL IDAVMAGVAP RKRDPHKPLR LGVVEDAFWQ GVDAAMAQAC RDKLNTLEDA
GVHLVPLSAP DLMARCADIS MGIVLYETQI YWDAFLASRD TTMIAFADQI ASPDVASIFG
HVASGAAPSD ADYAQMSGPK RRAICKIVTD LLADVDGLIM PTLATTAPLI DQTETCRING
EEVDLFNALT ARALVASITG HPEISLPAGQ LGGLPIGLGI LGTHGQDDEL LAVAAQIEPL
LAATN
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