| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3976 |
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| Symbol | |
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| ID | 3936457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4075837 |
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| End bp | 4076862 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906354 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_511918 |
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| Protein GI | 89056467 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.753497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAC GCTTCACAAA GACATTCGGA CTGAAATACC CCTTGGCACA GGCGGGCATG
GCCTTTGCCG GTGCAGAGCC GGACCTGGCC ATCGCGGTCT GCAAAGGCGG CGGCATCGGG
TCAATCGGGG TTGGTTTCAC CCCCGGAGAG GTCTTGCGCG GGATGATTGG GACGATCCGC
GCCGCCACTG ACGCGCCGTT CAACATCAAT TTCATCACCT GTTTCGGAAA CGATGAACAA
GTCCGCGTCG CCGCCGAGGA AAAGGTGCCG GTGGTGTCCT TTCACTGGGG CCACCCCCCG
GCGGATCAGA TCAAAATGCT CAAAGATGCA GGCTGTTCGA TCTGGGTACA GGTTGGCACG
GTCGAGGATG GGTTGCAGGC CGTAGACTAT GGCGCTGACG TGATCGTCGC CCAGGGTTGG
GAGGCAGGCG GGCACAATTA TGGCGGCATG GGATCGATGG CGCTGATCCC CGCGATGGTG
GACGCTGTGG GCGATCGCGC GATGGTCCTT GCATCAGGCG GTATCTCCGA TGCGCGTGCG
GCAGCGGCAG CGATGGTTCT GGGCGCGGAC GGCGTTTGGG TCGGCACCCG ACTGGTCGCC
AGCACCGAAG CCACGGTTCA CCGGGAACAT CACGCAAGAT TGGTCGCGGC AAGCGGCACC
GATACCACCC GGTCTGCCGT GTTCGGGCCG GAAATGCCCC ACTTCAACCC GATGCGACTG
CTCAAGGTGC GTGTCACCGA GGAGTTTGAA GGGCGCTTGC AGGATGTCCC GATGGAGCGG
GATAATGAGC CGATCATCGG CGAAACCCTT CTTGGGGGGC AAAAGCACAT CAAGCGTCGG
TTCGACGTGA TCCTGCCAAC GGAAGACACC ACCGGCGACT TTGAGGAAAT GGCGTGGCTT
GCCGGTCAGG GCGTGGGGCA GGTCAGGGAT ATCAAGCCCG CCGCACAGAT CGTGGAGGAG
ATGATGGACG GGGCAAACGA CCTTCTTAAT CGCATGGGCG CGTCGATCCC GACGGCAGCG
GAGTGA
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| Protein sequence | MATRFTKTFG LKYPLAQAGM AFAGAEPDLA IAVCKGGGIG SIGVGFTPGE VLRGMIGTIR
AATDAPFNIN FITCFGNDEQ VRVAAEEKVP VVSFHWGHPP ADQIKMLKDA GCSIWVQVGT
VEDGLQAVDY GADVIVAQGW EAGGHNYGGM GSMALIPAMV DAVGDRAMVL ASGGISDARA
AAAAMVLGAD GVWVGTRLVA STEATVHREH HARLVAASGT DTTRSAVFGP EMPHFNPMRL
LKVRVTEEFE GRLQDVPMER DNEPIIGETL LGGQKHIKRR FDVILPTEDT TGDFEEMAWL
AGQGVGQVRD IKPAAQIVEE MMDGANDLLN RMGASIPTAA E
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