| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3975 |
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| Symbol | |
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| ID | 3936456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4074742 |
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| End bp | 4075740 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906353 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_511917 |
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| Protein GI | 89056466 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.482665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGC TCAGGAAGTG CTATGGGATC GTCGGGGCCG ATGATATCGT CAGTGAAATG
AAGACATGGC AAGTCACCTC AAACGACCCG CATGAGGGTC TGACCAAATG GGCCGACGGC
TTGGATGAGG CCTTCGTGCA GCTGGAGCCC GTGGCCACCA CCGGCGACGG GTTCTACGGA
CACATACAGC AGACATCAAC GGCGGAGCTT GATGTCTCCG TCGTGACATC GACCGGCCAC
GAGATACGGC GGCTTGACCG TCACATCCGG CATCGCTCGG CGGACCTTTT GTACGTGAAT
ATTCTGGGCC GGGGGCGCAG CGAAGTCTCC CAACGTGACA CGGTCGTGGC GGCCCCCATG
GACGTATCGA TTGTCGATCC CCGGGCGCCC TACTCCATCC GACAAGAGGC TCCGTTTCAA
TTGGTGTCCA TTGCGGTGCC ACCCGATTGG GTCGAACGCG AGGCGCGCCA TTGTCACTTC
CTCAGCCGAA CCGCTGCCGG GCGCGAGTTA TCCAGTGTTG TCTGGGGGTT GGCCAAGATG
CTTTTGGCCA TCAAGCCGGA TCAGGACGGC CTGGCAACTT CGTTGGCACA GCAAATCCAC
CATAGCCTGG CCTTGTTGCC AGAGATGGCG GGGTCAGACG CCACCCCGCG CGTTAGCGTC
GCAATGCTGC AAAGCTACGT GCAGCGCCAT TTTAGCCAGC CTGATTTGCG GGCCGAGCAC
CTCGCCCGAC AGTTTGGCAT TTCGGTGCGG CGCGTGCATC AGTTGTTTGA GCCTACAGGA
CACACAGTGT CGGAATTCAT CAACGACCTC CGCCTTGCCC GTGCCGCTGA TTGCCTGGGT
GACGCCGCCC TGGCAAGGCG CACGATCTCG GAAATCGCCT GGCAGGTTGG CTATAGCGAT
CCGTCCTACT TCACCCGCCG GTTCAAGCGA CGCTACGGAT GCTCGCCCCG TGCGTACCGT
GCGGCCCATC ATCCGGCTCC GATTGCGCGT TTGTCCTAG
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| Protein sequence | MQALRKCYGI VGADDIVSEM KTWQVTSNDP HEGLTKWADG LDEAFVQLEP VATTGDGFYG
HIQQTSTAEL DVSVVTSTGH EIRRLDRHIR HRSADLLYVN ILGRGRSEVS QRDTVVAAPM
DVSIVDPRAP YSIRQEAPFQ LVSIAVPPDW VEREARHCHF LSRTAAGREL SSVVWGLAKM
LLAIKPDQDG LATSLAQQIH HSLALLPEMA GSDATPRVSV AMLQSYVQRH FSQPDLRAEH
LARQFGISVR RVHQLFEPTG HTVSEFINDL RLARAADCLG DAALARRTIS EIAWQVGYSD
PSYFTRRFKR RYGCSPRAYR AAHHPAPIAR LS
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