| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3973 |
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| Symbol | |
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| ID | 3936454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4070033 |
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| End bp | 4070923 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906351 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_511915 |
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| Protein GI | 89056464 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.981589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATTC GCCTTCTTCG AACCCTCGTC GCCGTGGCCG ACGCCAAGAC GTTCTCCGCG
GCGGCGGATG TCGTGCACGT CACCCACGCC GCCGTCAGCC AACAGATGCA GGCGCTCGAA
GCGGACCTTG GCGTTGCCCT GTTCAACCGC ACCACCCGCA CGCCCGAGCT GACACCGATT
GCCCGCCAGA TCGTTGCCAA AGCCCGCGTG CTTTTGGCCG ATTATGACGG CCTCGTGGCC
TCGGTCATGG AGGAAGATGG CCTCAGCGGT GATCTGCGTC TGGGCGCGCT TGGGACCACG
CTGACAGGCC TGACGCCCCG GGCCATGGCC ATCCTGAAGC GGCGTTTCCC CGGCATTGGC
CTGCATATCC GCCCCGGCCT GACCGGAGAA CTTCTTGCTG ATATTGAGCG GGGCACCCTG
GATGCGGCCA TTGTCACCAA GCCACATCTT CTGCCCCAGC GCATCCGGTT TCAGCGCCTC
GCGGAGGAAC CTCTGCAACT GATCGCCCCG CAGGATGAGC ACAGCGATGA TCCGTTCGAG
TTGCTGCACA GCCGCCCGTT CATCCGCTTC AACCGCAACG CCGTCCTGGG AACGTTGATC
GAGAACTGGA TCCTTTCCAA ACGCGTGCAG GTGTCCGAGG CGATGGAGCT GAACAGCGCC
GAGGCGATTT CCAGCATGGT GCAGGCGGGT CTGGGTGTAT CCATCGTGCC GGATCTGGCG
GTGACGCCAC AAGACGGCGT GCGCGTCAAA CGACTGCCCC TTGGGGACGA CGCGCCAAGC
CGCATCCTAG GCCTTGCCTG CCATAAAGAT CAGGTCAAAC CCCGTGTGAT TGAAGAAGTT
TTTCGCGCCC TCACCAGCGT GATCCCCGCA GCGCAACGGG CCGCGCCATG A
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| Protein sequence | MTIRLLRTLV AVADAKTFSA AADVVHVTHA AVSQQMQALE ADLGVALFNR TTRTPELTPI
ARQIVAKARV LLADYDGLVA SVMEEDGLSG DLRLGALGTT LTGLTPRAMA ILKRRFPGIG
LHIRPGLTGE LLADIERGTL DAAIVTKPHL LPQRIRFQRL AEEPLQLIAP QDEHSDDPFE
LLHSRPFIRF NRNAVLGTLI ENWILSKRVQ VSEAMELNSA EAISSMVQAG LGVSIVPDLA
VTPQDGVRVK RLPLGDDAPS RILGLACHKD QVKPRVIEEV FRALTSVIPA AQRAAP
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