| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3971 |
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| Symbol | |
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| ID | 3936452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4068593 |
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| End bp | 4069273 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906349 |
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| Product | Fe-S type hydro-lyases tartrate/fumarate beta protein |
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| Protein accession | YP_511913 |
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| Protein GI | 89056462 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain |
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| TIGRFAM ID | [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.958609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCCCA CACCGAACAA ACCCCGCGAA ATTACCCTGT CCACCACACC GTCGGCTGAA
GCCATCGCGG ACCTGCGCCT GGGCGATGTC GTCTACCTCT CCGGCCTGAT GTATACGGCG
CGCGAGGGCG TCTACATGCG CGCCCTGGAG GACCGCGCAA ACATTCCGAT GGAACTGCCC
GCGCAATCGG CTGCGAACTT CCATTGCTCG CCCGCGGCCC GGATCAACGC CGATGGCTCG
TTCGACATGG GGGCCGTGAC GGCCACAGCG AGCTTCCGAT TTGCCAAGTG GTTGCCCGAA
TGGATGGCCA AGACCGGCGC GAAGCTGATT GTGGGCAAGG GTGGCATGAC CTCAAAGGAC
TACAAGGAAT ATTTCGTGCC CAACGGCGCA GTCTATCTGT CGACCGTGGG CTACGGCACC
GGCGCGCTTC TGGGGCGCGG GGTGGAGAAT GTGGAGGCTG TGCATTGGAA TGAAGAGCTT
GGGATCGCGC AGGCGATGTG GGTTCTGAAA TGCAACAGAA TGGGGCCGTT CATCGTGGCG
TCCGATATGA ATGGCGATTG CCTGTTCGAA CGGGAGAACG CCAAGATCGC GGAGAACGTC
GCGCGCGTTT ACGAGGGCAC GAAGCCCGCG ACGCTGAAAC GGTACGGCGA GAGTGATGAC
CGCACGGATG AAGTTATCTA G
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| Protein sequence | MSPTPNKPRE ITLSTTPSAE AIADLRLGDV VYLSGLMYTA REGVYMRALE DRANIPMELP
AQSAANFHCS PAARINADGS FDMGAVTATA SFRFAKWLPE WMAKTGAKLI VGKGGMTSKD
YKEYFVPNGA VYLSTVGYGT GALLGRGVEN VEAVHWNEEL GIAQAMWVLK CNRMGPFIVA
SDMNGDCLFE RENAKIAENV ARVYEGTKPA TLKRYGESDD RTDEVI
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