| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3956 |
|---|
| Symbol | |
|---|
| ID | 3936437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 4056017 |
|---|
| End bp | 4056334 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637906334 |
|---|
| Product | Rieske (2Fe-2S) protein |
|---|
| Protein accession | YP_511898 |
|---|
| Protein GI | 89056447 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.257278 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTGTG AGAAGACGTG GGTGGACGCC ATTGCCTTGG TGGACGTGGA AAAGGCCTGG
GTCACACGGG TGCAGGTGGG CGAGCGGACG CTGGCGATCT ACGACACGCC AGGCGGGCTG
TTCGCATCGG CGGCGCTGTG TAACCACGGC GGCGCGGACC TGTGTGACGG GTATTTCGAC
GGCCACGTGA TTGAGTGCCC GCTCCATCAG GGGGCGTTCG ACGTGCGCGA CGGGCGGCCG
GCTGGTGCCC CTGCGGTGCG GCGGATGCTG ACATATGAGG TGCGAGTGGC GGACGGAATG
GTACAGGTTT GGCTATAG
|
|---|
| Protein sequence | MPCEKTWVDA IALVDVEKAW VTRVQVGERT LAIYDTPGGL FASAALCNHG GADLCDGYFD
GHVIECPLHQ GAFDVRDGRP AGAPAVRRML TYEVRVADGM VQVWL
|
|---|
| |