Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3955 |
Symbol | |
ID | 3936436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 4055035 |
End bp | 4056027 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637906333 |
Product | fatty acid desaturase |
Protein accession | YP_511897 |
Protein GI | 89056446 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.303691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAGG CATCCGTGAA CATACGAGAT CCCGACGTGG CACATTCGAC GACGACAGGG GCGATCATCA CCCCCCTGAC CCAGGCTCTG GCCGAGGGAA AACTGACCCG GGAGCAGTTG AAGCACTTCA TGCAGCGCAG CAACGCGCCT GGCCTGTGGC GGGTGGCTTT GTGGCTGGTG ATGCTGGCAG GGTCGACCAT GCTAATCGTC CTGGCCTGGA ACAGCTGGTT GATCTGGCCT GCAATGTTTG TGCAGGGCGT GATCCTGGTC CATCACTTCT CGCTGCAACA TGAATGCGTG CATTACACGG TGTTTCGCAC GCGGTGGCTG AATGACGTGG TGGGGCAGAT TTGCGGCTAT ACGATCCTGC TGCCGCATCG GTTCTTCCGG TACGAGCATT GCGATCACCA CACCTATACG CAGGTCGTGG GTGAAGACCC CGAGCAGATC CCGATGCCGA AGACGTTCGG AGAGTACTTC CTGTATCTCA GCGCCCTGCC CTACTGGAAA ACCAAGTTCA CCGAGGTGTT TCGCCATGCA AGCGGTGGTC TGAGTGACGC GGAGCGCGGC TTCATCCCCA AGGAAGAGCA CGCCGCCGTC GCCCGCGATG CGCGTCTGAT GCTGGCGTTC TATGCCGCCT GCATTACCGG AATGGCCGCG AGCGGGTGGT GGGGCCTTGT CTGGCTGTGG TTCATCCCAC TGATCTTGGG TGAGCCCGTC ATGCGCTTCA TCCGCATGAC CGAACATGTG GGCCGCCCGA ATGTGGCGCA GATGAGTGAC AACACGCGCA CCAATCTCGT CTCTGCGCCG ATGCGGTTCC TGTGTTGGAA CATGAATTAC CACGCGGAGC ATCACTACGT CTCGTCGGTC CCGTTCCATG CGCTGCCCCG CCTGCATGAG ACGTTGAAGG ACCACATCCA TGTGGAGCCC GGAGGCTACA TCGGTGCGCA TCGGGACATC TGGCGGCAGA TCCGGGCCAA TAATGCCGTG TGA
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Protein sequence | MRQASVNIRD PDVAHSTTTG AIITPLTQAL AEGKLTREQL KHFMQRSNAP GLWRVALWLV MLAGSTMLIV LAWNSWLIWP AMFVQGVILV HHFSLQHECV HYTVFRTRWL NDVVGQICGY TILLPHRFFR YEHCDHHTYT QVVGEDPEQI PMPKTFGEYF LYLSALPYWK TKFTEVFRHA SGGLSDAERG FIPKEEHAAV ARDARLMLAF YAACITGMAA SGWWGLVWLW FIPLILGEPV MRFIRMTEHV GRPNVAQMSD NTRTNLVSAP MRFLCWNMNY HAEHHYVSSV PFHALPRLHE TLKDHIHVEP GGYIGAHRDI WRQIRANNAV
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