Gene Jann_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3955 
Symbol 
ID3936436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4055035 
End bp4056027 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content61% 
IMG OID637906333 
Productfatty acid desaturase 
Protein accessionYP_511897 
Protein GI89056446 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.303691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGG CATCCGTGAA CATACGAGAT CCCGACGTGG CACATTCGAC GACGACAGGG 
GCGATCATCA CCCCCCTGAC CCAGGCTCTG GCCGAGGGAA AACTGACCCG GGAGCAGTTG
AAGCACTTCA TGCAGCGCAG CAACGCGCCT GGCCTGTGGC GGGTGGCTTT GTGGCTGGTG
ATGCTGGCAG GGTCGACCAT GCTAATCGTC CTGGCCTGGA ACAGCTGGTT GATCTGGCCT
GCAATGTTTG TGCAGGGCGT GATCCTGGTC CATCACTTCT CGCTGCAACA TGAATGCGTG
CATTACACGG TGTTTCGCAC GCGGTGGCTG AATGACGTGG TGGGGCAGAT TTGCGGCTAT
ACGATCCTGC TGCCGCATCG GTTCTTCCGG TACGAGCATT GCGATCACCA CACCTATACG
CAGGTCGTGG GTGAAGACCC CGAGCAGATC CCGATGCCGA AGACGTTCGG AGAGTACTTC
CTGTATCTCA GCGCCCTGCC CTACTGGAAA ACCAAGTTCA CCGAGGTGTT TCGCCATGCA
AGCGGTGGTC TGAGTGACGC GGAGCGCGGC TTCATCCCCA AGGAAGAGCA CGCCGCCGTC
GCCCGCGATG CGCGTCTGAT GCTGGCGTTC TATGCCGCCT GCATTACCGG AATGGCCGCG
AGCGGGTGGT GGGGCCTTGT CTGGCTGTGG TTCATCCCAC TGATCTTGGG TGAGCCCGTC
ATGCGCTTCA TCCGCATGAC CGAACATGTG GGCCGCCCGA ATGTGGCGCA GATGAGTGAC
AACACGCGCA CCAATCTCGT CTCTGCGCCG ATGCGGTTCC TGTGTTGGAA CATGAATTAC
CACGCGGAGC ATCACTACGT CTCGTCGGTC CCGTTCCATG CGCTGCCCCG CCTGCATGAG
ACGTTGAAGG ACCACATCCA TGTGGAGCCC GGAGGCTACA TCGGTGCGCA TCGGGACATC
TGGCGGCAGA TCCGGGCCAA TAATGCCGTG TGA
 
Protein sequence
MRQASVNIRD PDVAHSTTTG AIITPLTQAL AEGKLTREQL KHFMQRSNAP GLWRVALWLV 
MLAGSTMLIV LAWNSWLIWP AMFVQGVILV HHFSLQHECV HYTVFRTRWL NDVVGQICGY
TILLPHRFFR YEHCDHHTYT QVVGEDPEQI PMPKTFGEYF LYLSALPYWK TKFTEVFRHA
SGGLSDAERG FIPKEEHAAV ARDARLMLAF YAACITGMAA SGWWGLVWLW FIPLILGEPV
MRFIRMTEHV GRPNVAQMSD NTRTNLVSAP MRFLCWNMNY HAEHHYVSSV PFHALPRLHE
TLKDHIHVEP GGYIGAHRDI WRQIRANNAV