| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3953 |
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| Symbol | |
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| ID | 3936434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4052835 |
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| End bp | 4053800 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906331 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_511895 |
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| Protein GI | 89056444 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.386735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.188606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTGT TAATGTATTC CATTAGCCTC GCTTATATGA TCCGCAATCT CCCCTATGCC
TCCCTCCGTG CGTTTGAGGC CGTGGTGCGC CTCGGCAGTT TCTCGGCGGC TGCGGGCGAT
CTGGGTGTCA GCCAAAGCGC GGTCAGCCAG CATGTGAAAT CGCTGGAGGA ATGGCTGGGG
CAGGAGCTGC TGGTGCGCGG CGCGCGGGCC TCCAAAGGCA CCCGCTACGG AACCCTTCTG
GCGCGTGAGA TTGACCGGGG TCTTGGCGGC ATATCGGAGG TTTGCACCCA GATTCGCGCC
GCGTCCCATT CCGACACCAC CGTGGTGATT TCCTGCCTGC CGGGGTTCGC ATTCACCTGG
CTGTTCCCGC GCCTGTTGCG CTTTGACCTC GCCCATCCCG ACCTGTCGAT CTCCATCGCC
ACGGACACCG GCGGACGGCC CTTCAACCCC GCGGACGCCG ATATCGGTAT CCGCTACGGG
CACGGCGAAT TCCCCAACCT GCGGGTGGAT CATCTGATGG GTGAGCGGCT GTTTCCCGTC
TGCGCGCCGC AGGTCGCGGA GCGGTTGACC GACGTCGCAT CCCTTGGCCA GCACACGCTG
CTGCAGGACG AAATCCTCAA CTTCGGCTCC GCCAATCCGT CTTGGGAATA CTGGGCCGAG
GCTTGTGGCG TTCACCTGCC GTCCCGCGCC CGCACCCGGC GGTTCGGGCA ATCCAACCTT
GTGCTTCAGG CCGCGATTGA AGGCCTTGGT GTGGCGCTGG GGCGGGAGCC TTTAGTGCTG
GATGCGCTGA CCGATGGCCG CCTGGTGCGG CCCTTCACGC AGAATGTCAA ATCGCCGTTG
TCCTACTGGC TGGTGCGCCG CAAACAGGCC GATGACAGCC CCAAGGTGCA GGAGTTTCTC
AAATGGATCA AAAAAGAGGC GGAAACCCAG CCCGATATTC CCGCATCGCT CAATAAGTTC
GCCTAA
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| Protein sequence | MKVLMYSISL AYMIRNLPYA SLRAFEAVVR LGSFSAAAGD LGVSQSAVSQ HVKSLEEWLG
QELLVRGARA SKGTRYGTLL AREIDRGLGG ISEVCTQIRA ASHSDTTVVI SCLPGFAFTW
LFPRLLRFDL AHPDLSISIA TDTGGRPFNP ADADIGIRYG HGEFPNLRVD HLMGERLFPV
CAPQVAERLT DVASLGQHTL LQDEILNFGS ANPSWEYWAE ACGVHLPSRA RTRRFGQSNL
VLQAAIEGLG VALGREPLVL DALTDGRLVR PFTQNVKSPL SYWLVRRKQA DDSPKVQEFL
KWIKKEAETQ PDIPASLNKF A
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