| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3947 |
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| Symbol | |
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| ID | 3936428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4046142 |
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| End bp | 4047434 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906325 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511889 |
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| Protein GI | 89056438 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00472137 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.430362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCC TCCTTATCTA TGTGGCGATC TTCATTGGTG CCTTCTTCGC GGTGCGCCTG
ATCGCCGGGG CCGTATCGCC CACCGGGTTT TCCTCGCTCA AGACAGTCAC CTTTGGCGAT
GAAAGCGCGG TGATCCCGGA CAGGCGCGCC TCCGTCATCT CGATCCTGGC GCTCTTCTTT
CTTTGGGCCA CGTTCACCGG GTCGGTCATC ATCCCGTCCT TCCTGCATAT GCCCGGCCCC
CCCCTGGGCC TGCATACATT CACCCACACC GTGCAGGATG CCGACGGCAA CACCGACGAC
GCCACCGTGA CGTTCCTTCT GTTCGAGACG GAGCAAGACG AGGAGGGCAA CGATTTGCCC
GATCCCGAGG CCCCCGAAGT GGAGCCCGGC GATGGCTTTG CCCTGAACGA CAGCCTCGTG
ATCGAGGCCT ACGGATCAGA ACTGGCGCGT CTGCAAAACA ACGACGTTCT GACGCGCGAT
GACGGGACCA CCATCGTCGC CGTCAATGGC CAGCCGATTG AAGCGGGTGG CCGGTTGGAG
CTGGATTTTG GCACCGTGAC CATGTCCACC CGCGGTTCGA TCAATATTTT GCCAGACCAG
GGCCTACAGA TGGAGCCGAT CTGGCTGCCG CCGCCGGAAA ATGTGGTGGC CCGCCTGATC
GAAATTTCCC AGGACGGCTT CCGCAACTAT ACGCTGATCG AGCACTTGGG TTACTCGCTG
TTCCGCGTGG TCGTGGGCTT CGTGCTTGGC GCGCTGGTGG GCATCCCGCT CGGCTACGCC
ATGGGCCTGT CGAACTGGGC GCGCGGGTGG TTTGACCCGA TCGTGGAATT CATGCGCCCC
GTGCCGCCGC TGGCCCTGAT CCCGCTGGTG ATCATCTGGG CGGGCATCGG AGAGGCGGGC
AAGATCGTCC TGCTGTTCCT GGCGGCGTTG TGGATCATGG CGATTGCGGC GCGGGCCGGG
GTGTCTGGCG TCAACATCTC CAAGGTCCAC GCGGCCTATT CGCTGGGGGC GTCAAAGGCG
CAGATCATGC GGCACGTGAT CGTGCCCAAC TCGCTCCCCG AGATCTTCAC CGGTGCACGG
GTGGCGATGG GCGTATGCTG GGGCACGGTT GTGGCGGCGG AACTTGTGGC CGCTGTGCAG
GGCGCGGGCA TGATGATCAT GGTCGCCTCG CGGTTCCAGA ACACGGACAT CGTGATCCTG
GGCATCATCC TGATCGGCAT GATCGGCTTC GGCATCGATA TCCTGATGCG GATTGCCGAG
AACTGGCTGG TTCCGTGGAA GGGCAAGAGC TGA
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| Protein sequence | MIPLLIYVAI FIGAFFAVRL IAGAVSPTGF SSLKTVTFGD ESAVIPDRRA SVISILALFF
LWATFTGSVI IPSFLHMPGP PLGLHTFTHT VQDADGNTDD ATVTFLLFET EQDEEGNDLP
DPEAPEVEPG DGFALNDSLV IEAYGSELAR LQNNDVLTRD DGTTIVAVNG QPIEAGGRLE
LDFGTVTMST RGSINILPDQ GLQMEPIWLP PPENVVARLI EISQDGFRNY TLIEHLGYSL
FRVVVGFVLG ALVGIPLGYA MGLSNWARGW FDPIVEFMRP VPPLALIPLV IIWAGIGEAG
KIVLLFLAAL WIMAIAARAG VSGVNISKVH AAYSLGASKA QIMRHVIVPN SLPEIFTGAR
VAMGVCWGTV VAAELVAAVQ GAGMMIMVAS RFQNTDIVIL GIILIGMIGF GIDILMRIAE
NWLVPWKGKS
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