| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3944 |
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| Symbol | |
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| ID | 3936425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4043650 |
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| End bp | 4044918 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906322 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_511886 |
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| Protein GI | 89056435 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.282645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAC TGCAAACCCT GCGGCTGACC TGTGCTGCGA CCGCTCTGAT GGCCGCGGGC
ACCGCTCACG CCGATGAAGT GAGCTTCCTG TGCTATCAAA ACGGCAATGA ATGCGACGTG
CTGGCGGCAA TTGCGGCGGA TTATGAGGCC GAAACCGGTC ACACCGTCGC CATGGAGGTC
GTGGGCTATG AGATCGTCCG CGATCAGTTG GAAAACCAGC TGCAAACCGA TGCCGCGCCT
GACGTGGCCC GCGTGACCAA TCTGGGCGGT TTGAACCAGT ATTACCTGGA CCTGACGCCC
TATGTGGATG CCGATTACAT GGAAGCCGCC TATGGCGCGG TTCTGCCGTG GTATCGCGCG
CCCGGCGGTG AAGACACGGG CATCTACGGC TGGCCGACCG AGCTGACCGT GACCGGCCCC
TATATCAACG TCACCATGTT TGACGACGCG GGCGTCGAGA TCCCCGGCGA CGGGGCCACG
TGGGATGAGT GGATGGTTGC GCTTGGCGAG GTTCAGGAAA CGCTTGGCAT GGACGCAGCC
TTCGCGATGG ACCGCACCGC CCACCGTTGG GCCGGGCCTG CGTTCTCCTA TGGCGCTGCC
TTCTTTGACG ATGCAGGCGC GCCGATCCTC GTGGACGAGG GCTTTACCAT CTACGCCGAG
ACCTTCGTGG GTTGGCACGA GAGCGGGTTG ATGCCCGCCG ATGGCTGGCC CGCAGGCACC
GGCACGGCCT ACCGCAACGC CGCGCCTCTG TTCCTGTCTG GATCGGTTGC CATGCATATG
TCGGGATCCT GGATGATCGG CAACTACGCC GAAAACATCA CCGATTTTGA ATGGCGCGCC
GTTCCCGCCC CCTGCGGTCC CGGCGGCTGT GGCGCAATGC CCGGCGGCGC TGGCATCGTG
GCGTTCAACT CCACCGATGT GCCCGAGGCG GCAGCGGGCT TGATCGCCCA TTTCGCGTCC
GAGGAAAACA CGGCACGCTT CGCGGCTGAG ACGTCCTCCA TCACCGCGCA TGCAGGCCTG
CAAGCATCCG GGGTGGATTA CGGCGATGCG GATCCGGCGG TGGCGCAGGC CCTGTCGACC
TTCGCGGCCT CCATCGGCAC AGCGGCAGAG ACGACACCTC AGGCCTTCAC CTTCCAGGGC
TACGCCCAGA ACTTCGTGAT CTACGGCGTG GTGCCGGACT ACATCACGCA GGTCATCACC
GGTGAATCCA CGCTGGAAGA TGCGTTGGCT GCCATCGACG CGGACGTCGC CGCACAGATC
GCGGAATAA
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| Protein sequence | MTKLQTLRLT CAATALMAAG TAHADEVSFL CYQNGNECDV LAAIAADYEA ETGHTVAMEV
VGYEIVRDQL ENQLQTDAAP DVARVTNLGG LNQYYLDLTP YVDADYMEAA YGAVLPWYRA
PGGEDTGIYG WPTELTVTGP YINVTMFDDA GVEIPGDGAT WDEWMVALGE VQETLGMDAA
FAMDRTAHRW AGPAFSYGAA FFDDAGAPIL VDEGFTIYAE TFVGWHESGL MPADGWPAGT
GTAYRNAAPL FLSGSVAMHM SGSWMIGNYA ENITDFEWRA VPAPCGPGGC GAMPGGAGIV
AFNSTDVPEA AAGLIAHFAS EENTARFAAE TSSITAHAGL QASGVDYGDA DPAVAQALST
FAASIGTAAE TTPQAFTFQG YAQNFVIYGV VPDYITQVIT GESTLEDALA AIDADVAAQI
AE
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