| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3943 |
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| Symbol | |
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| ID | 3936424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4042555 |
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| End bp | 4043616 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637906321 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511885 |
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| Protein GI | 89056434 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.587147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGACGG CGATTGAAAA CGCCTTCGCG GGCTCGTCCT GGCCTCTTGC TTTCCTTGTG
TATCTTATCG TGGGGGCCTT GATTGCACGG CCCTCCGGCA CCCTGTCGTC CCGCGCCATG
GCCGTGCTCG GCTGGCCGAT TGAACTGGCC CAGAAGATGC GCGGCCACGG GCCGTTGCCC
TATCTGTTCC TGCTGCCGAA CCTTCTGGTC TTCGGCATCT TCACCTTCGC ACCGCTGTTC
ATCAACGTGG GCTTTTCGGT CACCGAAGGC CAGTCCATCA ATTTCGCCGA CCGCCCCTTT
GCGGGCACCG ACAACTGGCA GCGCCTGCTG GCGGAAACCC AGATCGACAC CGGCGCGCCA
AATCTGGAAG ACGACCAATT CTACCGCGCG GTCATGGACA CATCGGTCTT CGTCATCTTC
CAAGTGCCGA TCATGGTGCT GTTTTCCCTG ATCACCGCGC TGGTCCTGAA CCGCGATATC
GTGGCGCGCG GCCTCTGGCG GTCGATCTTC TTCTACCCTG TCATGCTGTC GCCCGTCGTG
GTCGGCTTCC TTTGGACGCT GATCCTGAAA CGTCAGGGCG TGTTGTCGAT CACCCTGATG
GAATGGGGCT GGATCGATGC GCCGATCCAA TGGCTGGTGG ACCCGGCCTG GACGATGTTT
TGGTCCGTTT TCGTGTTCAC CTGGGCACAC TTGGGCTTCT ATATGCTGAT CCTTCTGGCG
GGCTTGCAAG CGATCCCATC GGACCTCTAC GAAGCAGCTG AAATGGACGG CGCGTCCCCT
TGGCGTGTGC TGCGCAAGAT CACCTTGCCG TTGTTGATGC CCACCCTGCT GGTCGTCACG
GTCCTGTCCC TGATCAAGGC GTTCCAGGCC TTTGAAGAGC TCTACGCCAT GCAGGTCGGC
TGGATCTCCA TCGTGGCCTA TATCTTTGAA ACCGCTGGCC TGCGCGGCAA CCCAACGCCC
AACGGCCTCG GCATCGCGGC GACCGCGTCG CTGATTATCG CGGGCGCGCT GGCGATCTTC
TCGATCATCC AGATCTTCCT CAGCGGTCGG TCCGCGCGAT GA
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| Protein sequence | MWTAIENAFA GSSWPLAFLV YLIVGALIAR PSGTLSSRAM AVLGWPIELA QKMRGHGPLP
YLFLLPNLLV FGIFTFAPLF INVGFSVTEG QSINFADRPF AGTDNWQRLL AETQIDTGAP
NLEDDQFYRA VMDTSVFVIF QVPIMVLFSL ITALVLNRDI VARGLWRSIF FYPVMLSPVV
VGFLWTLILK RQGVLSITLM EWGWIDAPIQ WLVDPAWTMF WSVFVFTWAH LGFYMLILLA
GLQAIPSDLY EAAEMDGASP WRVLRKITLP LLMPTLLVVT VLSLIKAFQA FEELYAMQVG
WISIVAYIFE TAGLRGNPTP NGLGIAATAS LIIAGALAIF SIIQIFLSGR SAR
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