| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3941 |
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| Symbol | |
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| ID | 3936422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4040041 |
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| End bp | 4041114 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906319 |
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| Product | ABC transporter related |
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| Protein accession | YP_511883 |
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| Protein GI | 89056432 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.254931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTTC TAGAACTGCG CAACGTCAAG AAAGCCTACG GCCCGGTGGA GGTGATCCAC
GGCGTCGACA TCACGGTGAA GTCCGGTGAG TTCTGCGTAT TCGTCGGCCC CTCGGGCTGC
GGCAAGTCCA CGCTGTTGCG CATGATCGCG GGGTTGGAGG AGATCTCCTC GGGCGAGATC
GCCATCGACA ATGAGGTGTT GAACCACGTC CCCGCCTCCA AGCGCGGGTT GGCGATGGTG
TTCCAATCCT ACGCCCTGTA CCCCCACATG TCGGTGCGCA ATAACCTGTC CTTCGGCCTT
GAAAATATCG GCATGGAGCG GGCGGAAATC GATAGCCGCG TCGGGGAAGC CGCGCGGATG
CTGCAGATCG ACGATTACCT CGACCGTCGC CCCGGTCAGC TCTCCGGCGG GCAGCGCCAG
CGCGTCGCCA TTGGCCGTGC CGTGGTGCGG GAGCCGCGCG TGTTCCTGTT TGACGAGCCT
TTGTCGAACC TCGACGCGGA GCTTCGCGTT GCGACACGGG GAGAGATCAG CGAATTGCAC
CAGCGCCTTG GCAACACCAT GGTCTACGTC ACCCACGATC AGGTCGAAGC GATGACCATG
GCCGACAAGA TTGCCGTCCT GCGCGCCGGA AAGCTGGAAC AATTCGGCCC CCCGCTGGAG
CTGTTCAACG CCCCTGCCAA CCGTTTCGTG GCGGGCTTCA TCGGCTCGCC CAAAATGAAC
TTCATCCGGG GCACGATGGG CGAAAACGGC GCGTTCGTGT CCGAAGGTGG GGCCGAGGTC
GCCTTGGATG CGACCCGCTT CACCACGCGC GCGGGGCAGG CGGTGGAGTT GGGCGTGCGC
CCCGGTCACA CGAACCCGGC GGACGGCGAC GGCGTGCCAT TGCAGGTCCG CGCGGTGGAG
CAGTTGGGGA CGGAAACCTT CGTCTATGGC GCGGTCGCCG GGTCCGATGA CTTCGCCATG
CAACTGCCCG GACAGGTCAA CATTCAGGCC AAAACGACGC TGCAAGTGGC CATCGACGCC
TCCTCCGCGC ATCTCTTCGA TGTCGACACC GGGCTTAGCT GCACCAGATC CTGA
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| Protein sequence | MALLELRNVK KAYGPVEVIH GVDITVKSGE FCVFVGPSGC GKSTLLRMIA GLEEISSGEI
AIDNEVLNHV PASKRGLAMV FQSYALYPHM SVRNNLSFGL ENIGMERAEI DSRVGEAARM
LQIDDYLDRR PGQLSGGQRQ RVAIGRAVVR EPRVFLFDEP LSNLDAELRV ATRGEISELH
QRLGNTMVYV THDQVEAMTM ADKIAVLRAG KLEQFGPPLE LFNAPANRFV AGFIGSPKMN
FIRGTMGENG AFVSEGGAEV ALDATRFTTR AGQAVELGVR PGHTNPADGD GVPLQVRAVE
QLGTETFVYG AVAGSDDFAM QLPGQVNIQA KTTLQVAIDA SSAHLFDVDT GLSCTRS
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