Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3938 |
Symbol | |
ID | 3936419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4036641 |
End bp | 4037405 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637906316 |
Product | short chain enoyl-CoA hydratase |
Protein accession | YP_511880 |
Protein GI | 89056429 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.525947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA TTCACCTCAC CATCGATGGG GCTGTCGCGC GGATCACGTT GGACAATCCG TCCAAGCTGA ACGCGTTGAC CGTCGAGATG TTGGCGCAAC TGGAAACTGC CTGCGCGACC ATCGAACGCA ATCCGAACGT CCGCGCCGTC CTGATCATCG CTGAAGGCAA TCGCGCCTTC TGTGCGGGGG CGGATATCGG CGGCTGGGGC GCCCTTTCGC CGACGGACTT CGCGCGCCTT TGGGTCCGCG AAGGCCACCG CATCTACGAC CGCCTCGCGC GGTTGTCCAA GCCCACAATC GCGGTCCTTC AGGCCCATGC CTTCGGCGGC GGGCTGGAAC TGGCGGCCTG TGCCGATATG CGCATTATGG CCCCGGGGGC GACGCTCGCA CTGCCCGAGG CGAAGGTGGG GATCGTGCCC GGATGGGGCG GCACCACGCG GCTCTTGCGC CTGTTGCCAG AGGCGGTGGT CAAGGATATG GCGCTGTTCG GGCGGCGTGT GTCGGCGGAA AAGGCGCAGA TGCTAGGGTT CGCGGAGGTC TCTGACAATC CGCTTGGCAC TGCGGAAACC ATCGCCAAGG ACATGATCGC CGCCTCTCCC CGCGCCCACG AGATTGCAAA ATACCAGATC CATGCGGCGG TCGGCGAAGA TCGCAACGCG ATGATAGAGG CCTTGGGCGG TGGCATGGCT GCTGCGACCG CGGACAAGGC GGAGGGCGTG GCTGCCTTTG CTGAGAAACG CACACCCGAT TTCCGAGGGA CCTGA
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Protein sequence | MSAIHLTIDG AVARITLDNP SKLNALTVEM LAQLETACAT IERNPNVRAV LIIAEGNRAF CAGADIGGWG ALSPTDFARL WVREGHRIYD RLARLSKPTI AVLQAHAFGG GLELAACADM RIMAPGATLA LPEAKVGIVP GWGGTTRLLR LLPEAVVKDM ALFGRRVSAE KAQMLGFAEV SDNPLGTAET IAKDMIAASP RAHEIAKYQI HAAVGEDRNA MIEALGGGMA AATADKAEGV AAFAEKRTPD FRGT
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