Gene Jann_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3938 
Symbol 
ID3936419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp4036641 
End bp4037405 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID637906316 
Productshort chain enoyl-CoA hydratase 
Protein accessionYP_511880 
Protein GI89056429 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.525947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TTCACCTCAC CATCGATGGG GCTGTCGCGC GGATCACGTT GGACAATCCG 
TCCAAGCTGA ACGCGTTGAC CGTCGAGATG TTGGCGCAAC TGGAAACTGC CTGCGCGACC
ATCGAACGCA ATCCGAACGT CCGCGCCGTC CTGATCATCG CTGAAGGCAA TCGCGCCTTC
TGTGCGGGGG CGGATATCGG CGGCTGGGGC GCCCTTTCGC CGACGGACTT CGCGCGCCTT
TGGGTCCGCG AAGGCCACCG CATCTACGAC CGCCTCGCGC GGTTGTCCAA GCCCACAATC
GCGGTCCTTC AGGCCCATGC CTTCGGCGGC GGGCTGGAAC TGGCGGCCTG TGCCGATATG
CGCATTATGG CCCCGGGGGC GACGCTCGCA CTGCCCGAGG CGAAGGTGGG GATCGTGCCC
GGATGGGGCG GCACCACGCG GCTCTTGCGC CTGTTGCCAG AGGCGGTGGT CAAGGATATG
GCGCTGTTCG GGCGGCGTGT GTCGGCGGAA AAGGCGCAGA TGCTAGGGTT CGCGGAGGTC
TCTGACAATC CGCTTGGCAC TGCGGAAACC ATCGCCAAGG ACATGATCGC CGCCTCTCCC
CGCGCCCACG AGATTGCAAA ATACCAGATC CATGCGGCGG TCGGCGAAGA TCGCAACGCG
ATGATAGAGG CCTTGGGCGG TGGCATGGCT GCTGCGACCG CGGACAAGGC GGAGGGCGTG
GCTGCCTTTG CTGAGAAACG CACACCCGAT TTCCGAGGGA CCTGA
 
Protein sequence
MSAIHLTIDG AVARITLDNP SKLNALTVEM LAQLETACAT IERNPNVRAV LIIAEGNRAF 
CAGADIGGWG ALSPTDFARL WVREGHRIYD RLARLSKPTI AVLQAHAFGG GLELAACADM
RIMAPGATLA LPEAKVGIVP GWGGTTRLLR LLPEAVVKDM ALFGRRVSAE KAQMLGFAEV
SDNPLGTAET IAKDMIAASP RAHEIAKYQI HAAVGEDRNA MIEALGGGMA AATADKAEGV
AAFAEKRTPD FRGT