| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3929 |
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| Symbol | |
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| ID | 3936410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4025603 |
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| End bp | 4027189 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906307 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_511871 |
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| Protein GI | 89056420 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGG CATACGATTT CATCATCATC GGCGGCGGCT CGGCGGGGTC CGTCATCGCC
GCGCGATTGT CCGAAAACCC CGATGTGACC GTTTGTGTGC TGGAGGCCGG AAGGTCGGAC
CGCCACCCGT TTTTTCATCT GCCCGCGGGC TTTGCGAAGA TGACCAAGGG CATCGCGTCC
TGGGGCTGGA GCACGGTGCC GCAGGTCCAC ATGCAGGGCA AGGTCTTCAC CTATACGCAG
GCCAAGGTGA TCGGCGGCGG GTCAGCGATC AACGCGCAGA TCTACACGCG CGGGCACCCG
CTGGATTACG ACGAATGGCG GCAGTTGGGC TGTGACGGCT GGAGTTATGA GGACGTGTTG
CCCTACTTCC GCAAGTCCGA GGGCAACGAT AGTTTTGGCG GGCGGTATCA CGGTCAGGAC
GGCCCTTTGG GCGTGTCGAA ACCCGCCGCG CCCCTGCCGA TTTGTGAGGC GTATTTTGAG
GCCGCAAAGG CCCTCGGCAT TCCCTTCAAC GACGATGTCA CCGGAGCGGT GCAGGAGGGC
GCGGCCTATT ATCAGCTGAC CCAGAAGAAC GCCCGCCGGT CGTCGGCGGC GATGGCATTC
CTGCACCCCA ACAGGCACCG CGTGAACCTG AATGTGAAGC TGCGCGCCCA TGTGCGACGC
ATCGTGGTGG ACGGTGGCCG TGCCGTGGGT GTGGAGATGC TGGACGGCAC CCGCATCACT
GCGCGCCGCG AGGTGATCCT GACCAGCGGG GCCATCGGTT CGCCGAGGCT ATTGCAACTG
TCCGGCATTG GTCCGGCGGA TCACTTGCGC GAGCTTGGGA TTGATGTGGT GCTGGACCAG
CCGCAAGTGG GCAGCAACTT GCAGGATCAT CTGGACCTGT ATTGCATCGC CGAGGTCTCC
GGCCCCCACA CCTATGACCG CTTCGCCAAG CCGCATCTGA GCGTGCTGGC CGGGCTGCAA
TATTTGCTGA CGAAGACAGG CCCGGTGGCG AGCAGCCTGT TTGAGACCGG CGGCTTCTGG
TACGCCGACC CCGCCGCGCG TTCGCCGGAC CTGCAATTCC ATCTGGGTCT GGGCACGGGG
ATCGAGGCGG GCGTTGTCGC CATGCCCGAG GGCGGCGTGA CGCTGAATTC GTGTTATCTG
CGCCCCCGCT CGCGTGGAAC CGTCCGGCTG GCCAGCGCCG ATCCGGCCCG CGCGCCGTTG
ATCGACCCCA ATTATTGCGC CGACCCGCTG GACCGCGAGA TGTCCATTCG CGGATTAAAG
CTGACTCAGA AAATACTTTC ACAACAGGCG CTTAGCCAAA TGCTCAAGGT TGAGCACCTG
CCCGGCGAGG GCGTCCGCAA CGATGAGGAT TACTTCAACT TCATCTGCCA GCATTCCAAA
ACCTCCCACC ATTGTGCCGG GACCTGCGCC ATGGGACCGG GCGACAGCGC CGTCGTGACG
CCCCGCCTGA CATTCAACGG AATAGATGGC CTCCGCGTCG CCGATGCCTC CATCATGCCG
CGTGTCGTGT CCTCCAACAC CAACGCGCCC ACGATCATGA TCGGTGAAAA AGCCGCCGAT
ATGATCCGCG AAGACCAGGG AATTTAA
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| Protein sequence | MAEAYDFIII GGGSAGSVIA ARLSENPDVT VCVLEAGRSD RHPFFHLPAG FAKMTKGIAS
WGWSTVPQVH MQGKVFTYTQ AKVIGGGSAI NAQIYTRGHP LDYDEWRQLG CDGWSYEDVL
PYFRKSEGND SFGGRYHGQD GPLGVSKPAA PLPICEAYFE AAKALGIPFN DDVTGAVQEG
AAYYQLTQKN ARRSSAAMAF LHPNRHRVNL NVKLRAHVRR IVVDGGRAVG VEMLDGTRIT
ARREVILTSG AIGSPRLLQL SGIGPADHLR ELGIDVVLDQ PQVGSNLQDH LDLYCIAEVS
GPHTYDRFAK PHLSVLAGLQ YLLTKTGPVA SSLFETGGFW YADPAARSPD LQFHLGLGTG
IEAGVVAMPE GGVTLNSCYL RPRSRGTVRL ASADPARAPL IDPNYCADPL DREMSIRGLK
LTQKILSQQA LSQMLKVEHL PGEGVRNDED YFNFICQHSK TSHHCAGTCA MGPGDSAVVT
PRLTFNGIDG LRVADASIMP RVVSSNTNAP TIMIGEKAAD MIREDQGI
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