| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3922 |
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| Symbol | |
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| ID | 3936403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4019082 |
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| End bp | 4019918 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637906300 |
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| Product | peptidase S49 |
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| Protein accession | YP_511864 |
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| Protein GI | 89056413 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCCAA GGGCCCCGCC GCCTACATCG CATGGAATGA AACGTTTTAT CCCCTTTATG
TCGTCCGATC CCCGCGTCTC GGTCATCCGG TTGCAGGGCG CGATTGCGTC CGGCACGCGC
GGGGGCATCA ATGATGCGAC CTTCGCGCCG GTGATTGAGA AGGCCTTCGC CAAGGGCAAG
CCCAAGGCGG TGGCTTTGGT CATGAATTCG CCCGGTGGAT CGCCGGTTCA ATCCGCGTTG
GTTGCAGCCC GCATCCGGCG GTTGGCGGAA GAAAAAGACA TCCCCGTCCA TGCCTTCGTG
GAGGATGTGG CAGCCTCCGG CGGCTATTGG CTGGCCTGCG CTGCTGACGA CATCTGGGTG
GATCCGAGTT CCATCGTCGG CTCCATCGGT GTGGTCTCGG CGGGTTTTGG GTTTGTGGAG
GCGTTGGGCA AGCTGGGGGT GGAGCGCCGC GTGCACACCG CGGGCGAGAA CAAAAGCATC
CTCGATCCCT TCTCGCCTGA GAAGGACGAG GACGTTGAGC GCCTGAAATC ACTGCAAACC
GATATCCACG CGTCGTTCAT CGACCATGTG AAGACCCGCC GTGGGGATCG CCTGAAAGAT
CACCCGGAGA TGTTCACCGG CGCCTTCTGG ACTGGAACGC GCGGCGTGGA GCTGGGCCTG
GCAGACGGCA TCGCGCATCT GGTGCCGAAG ATGAAAGAGG TCTATGGCGA CAAGGTGACA
TTCACCGTCC ATGGCCCGAA GAAACCGCTG ATCCCGCGTC TGGGCGCGCA AGTGCTGGCC
GATCTGGACC AGAGCGTTGA GGAACGCGCG CTCTACGCCC GGTATGGGCT GACGTGA
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| Protein sequence | MLPRAPPPTS HGMKRFIPFM SSDPRVSVIR LQGAIASGTR GGINDATFAP VIEKAFAKGK
PKAVALVMNS PGGSPVQSAL VAARIRRLAE EKDIPVHAFV EDVAASGGYW LACAADDIWV
DPSSIVGSIG VVSAGFGFVE ALGKLGVERR VHTAGENKSI LDPFSPEKDE DVERLKSLQT
DIHASFIDHV KTRRGDRLKD HPEMFTGAFW TGTRGVELGL ADGIAHLVPK MKEVYGDKVT
FTVHGPKKPL IPRLGAQVLA DLDQSVEERA LYARYGLT
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