| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3921 |
|---|
| Symbol | |
|---|
| ID | 3936402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 4017939 |
|---|
| End bp | 4018889 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637906299 |
|---|
| Product | K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| Protein accession | YP_511863 |
|---|
| Protein GI | 89056412 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC AATTTGGCTT CGCGATCCTG GGGCTGGTGA TCCTGCTCCT GGCCGGTGAC
GTGCTGGTGA AGGGCGCGGT GAACCTGGCC CTGCGGCTGG GCATCCCGGC GTTGATCGTG
TCGCTGACGA TCGTGGCGTT TGGGACCTCC GCGCCTGAGC TGTTGATTTC CGTCCAGTCG
ATCCTTGATG GGGTTCCGGG CCTCGCCCTT GGGAACGTCG TGGGCTCAAA CACGGCAAAT
GTGCTGCTGG TGCTGGGGGT GCCTGCCCTG CTGGCGGGTC TGGCGGCCAC CAGCGACACG
CGGCGTGAAT ACACGTTCAT GATGGTGGGC ACGCTTCTGT TCATTGGCCT GTGTTTCCTT
GGGCCATTGA CGTGGTGGCA CGGGGTGATC CTGCTGATCG GTCTGGGGTT CGTGCTGGGC
GATGCCGTGC GCAAAGCCCG CGCGCACCGC AAATCCGACA ACGGCGATGA CGATCTGGAT
GATCTGGAAG AGGCCGATCC CGACATGCGC TGGTGGAAGA TCGGCGTCTA CCTTGCGTTG
GGCCTTGTGG GCCTGCCCCT GGGGGCGAGC CTGTTGATTG ACAGCGCCAC GGCGATTGCG
ACGGAATACG GTATCTCGGA TGCGGTCATT GGCCTGACGC TGGTGGCCGT GGGCACGTCA
CTGCCGGAAC TTGCGACCAC CGTCATGGCC GCGTTCCGTC GCCAGGCGGA TGTCGCGATT
GGGAACGTCA TCGGCTCAAA CGTCTTCAAC CTTCTGGCGA TCATCGGCAT CGCGGTCTTC
GTGGGGCCCA TCCCCGTCGA CCCGGATATC CTGCGGTTCG ACTTGTGGGT GATGCTGGCG
GCCTCCGTCG TGTTGGCGCC CTTCGTGTTC TTCCGCTGGG GTATGGGGCG TCTCGTCGGT
CTGGCTTTTA CTGGCCTGTA TGTGGGCTAT ATGATGCTCC TCTTGATGTA G
|
|---|
| Protein sequence | MADQFGFAIL GLVILLLAGD VLVKGAVNLA LRLGIPALIV SLTIVAFGTS APELLISVQS
ILDGVPGLAL GNVVGSNTAN VLLVLGVPAL LAGLAATSDT RREYTFMMVG TLLFIGLCFL
GPLTWWHGVI LLIGLGFVLG DAVRKARAHR KSDNGDDDLD DLEEADPDMR WWKIGVYLAL
GLVGLPLGAS LLIDSATAIA TEYGISDAVI GLTLVAVGTS LPELATTVMA AFRRQADVAI
GNVIGSNVFN LLAIIGIAVF VGPIPVDPDI LRFDLWVMLA ASVVLAPFVF FRWGMGRLVG
LAFTGLYVGY MMLLLM
|
|---|
| |